RNA–Protein interactions for RNA: ENSMUST00000106149.7

Ssx2ip-202, Transcript of Afadin- and alpha-actinin-binding protein, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssx2ip, Length 2,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssx2ip-202ENSMUST00000106149 NischQ80TM9 1593 aa48.45■■■■■ 5.35
Ssx2ip-202ENSMUST00000106149 Gm35339A0A140LHH9 1649 aa47.83■■■■■ 5.25
Ssx2ip-202ENSMUST00000106149 Abcc9P70170 1546 aa47.08■■■■■ 5.13
Ssx2ip-202ENSMUST00000106149 Abcc8B2RUS7 1588 aa46.1■■■■■ 4.97
Ssx2ip-202ENSMUST00000106149 Rhox8Q6VSS7 320 aa44.48■■■■■ 4.71
Ssx2ip-202ENSMUST00000106149 Rtl1Q7M732 1744 aa43.81■■■■■ 4.6
Ssx2ip-202ENSMUST00000106149 ScribQ80U72 1612 aa43.1■■■■■ 4.49
Ssx2ip-202ENSMUST00000106149 Dcaf1Q80TR8 1506 aa43.01■■■■■ 4.48
Ssx2ip-202ENSMUST00000106149 Ccdc180J3QNE4 1664 aa42.91■■■■■ 4.46
Ssx2ip-202ENSMUST00000106149 Rb1cc1Q9ESK9 1588 aa42.44■■■■■ 4.39
Ssx2ip-202ENSMUST00000106149 Zcchc6Q5BLK4 1491 aaKnown RBP42.31■■■■■ 4.36
Ssx2ip-202ENSMUST00000106149 Kdm5dQ62240 1548 aa42.26■■■■■ 4.36
Ssx2ip-202ENSMUST00000106149 Baz1aO88379 1555 aa41.96■■■■■ 4.31
Ssx2ip-202ENSMUST00000106149 NacadQ5SWP3 1504 aa41.95■■■■■ 4.31
Ssx2ip-202ENSMUST00000106149 Ccdc136Q3TVA9 1136 aa41.27■■■■■ 4.2
Ssx2ip-202ENSMUST00000106149 Crybg2B7ZCC2 1516 aa41.25■■■■■ 4.19
Ssx2ip-202ENSMUST00000106149 Sycp2Q9CUU3 1500 aa41.04■■■■■ 4.16
Ssx2ip-202ENSMUST00000106149 Smarca2Q6DIC0 1577 aa41■■■■■ 4.15
Ssx2ip-202ENSMUST00000106149 HrcG5E8J6 738 aa40.88■■■■■ 4.13
Ssx2ip-202ENSMUST00000106149 Trim41Q5NCC3 630 aa40.51■■■■■ 4.07
Ssx2ip-202ENSMUST00000106149 Rpgrip1Q9EPQ2 1331 aa40.4■■■■■ 4.06
Ssx2ip-202ENSMUST00000106149 BicraF8VPZ9 1578 aa40.15■■■■■ 4.02
Ssx2ip-202ENSMUST00000106149 Cecr2E9Q2Z1 1453 aa40.01■■■■■ 4
Ssx2ip-202ENSMUST00000106149 Brd4Q9ESU6 1400 aaKnown RBP39.98■■■■□ 3.99
Ssx2ip-202ENSMUST00000106149 Cep164Q5DU05 1446 aa39.82■■■■□ 3.97
Ssx2ip-202ENSMUST00000106149 Acin1Q9JIX8 1338 aaKnown RBP39.8■■■■□ 3.96
Ssx2ip-202ENSMUST00000106149 Synj1Q8CHC4 1574 aa39.67■■■■□ 3.94
Ssx2ip-202ENSMUST00000106149 Ehmt2Q9Z148 1263 aaKnown RBP39.59■■■■□ 3.93
Ssx2ip-202ENSMUST00000106149 Cngb1E1AZ71 1325 aa39.52■■■■□ 3.92
Ssx2ip-202ENSMUST00000106149 Golga3P55937 1487 aa39.48■■■■□ 3.91
Ssx2ip-202ENSMUST00000106149 CftrP26361 1476 aa39.45■■■■□ 3.91
Ssx2ip-202ENSMUST00000106149 Rsf1E9PWW9 1441 aaKnown RBP39.41■■■■□ 3.9
Ssx2ip-202ENSMUST00000106149 Chic1Q8CBW7 227 aa39.29■■■■□ 3.88
Ssx2ip-202ENSMUST00000106149 Cttnbp2B9EJA2 1648 aa39.28■■■■□ 3.88
Ssx2ip-202ENSMUST00000106149 Smarca4Q3TKT4 1613 aaKnown RBP39.23■■■■□ 3.87
Ssx2ip-202ENSMUST00000106149 Ccdc88bQ4QRL3 1481 aa39.19■■■■□ 3.86
Ssx2ip-202ENSMUST00000106149 Top2bQ64511 1612 aa39.09■■■■□ 3.85
Ssx2ip-202ENSMUST00000106149 Esf1Q3V1V3 845 aaKnown RBP39.09■■■■□ 3.85
Ssx2ip-202ENSMUST00000106149 Gab3Q8BSM5 595 aa38.87■■■■□ 3.81
Ssx2ip-202ENSMUST00000106149 Iqgap2Q3UQ44 1575 aa38.71■■■■□ 3.79
Ssx2ip-202ENSMUST00000106149 Cc2d2aQ8CFW7 1633 aa38.7■■■■□ 3.79
Ssx2ip-202ENSMUST00000106149 Atad2bE9Q166 1460 aaKnown RBP38.57■■■■□ 3.76
Ssx2ip-202ENSMUST00000106149 Fmn1Q05860 1466 aa38.5■■■■□ 3.75
Ssx2ip-202ENSMUST00000106149 Pds5bQ4VA53 1446 aaKnown RBP38.42■■■■□ 3.74
Ssx2ip-202ENSMUST00000106149 Top2aQ01320 1528 aaKnown RBP38.3■■■■□ 3.72
Ssx2ip-202ENSMUST00000106149 Rapgef2Q8CHG7 1496 aa38.18■■■■□ 3.7
Ssx2ip-202ENSMUST00000106149 Pcgf6Q99NA9 353 aa38.1■■■■□ 3.69
Ssx2ip-202ENSMUST00000106149 Wdr62Q3U3T8 1523 aa37.98■■■■□ 3.67
Ssx2ip-202ENSMUST00000106149 Frmpd1A2AKB4 1549 aa37.98■■■■□ 3.67
Ssx2ip-202ENSMUST00000106149 TnnQ80Z71 1560 aa37.97■■■■□ 3.67
Ssx2ip-202ENSMUST00000106149 Cep162Q6ZQ06 1403 aa37.85■■■■□ 3.65
Ssx2ip-202ENSMUST00000106149 Ercc6F8VPZ5 1481 aa37.74■■■■□ 3.63
Ssx2ip-202ENSMUST00000106149 Lamc3Q9R0B6 1581 aa37.67■■■■□ 3.62
Ssx2ip-202ENSMUST00000106149 Eif4g1Q6NZJ6 1600 aaKnown RBP37.61■■■■□ 3.61
Ssx2ip-202ENSMUST00000106149 Npm2Q80W85 207 aa37.6■■■■□ 3.61
Ssx2ip-202ENSMUST00000106149 Mier1Q5UAK0 511 aa37.59■■■■□ 3.61
Ssx2ip-202ENSMUST00000106149 Unc13aQ4KUS2 1712 aa37.56■■■■□ 3.6
Ssx2ip-202ENSMUST00000106149 Myt1lP97500 1187 aa37.55■■■■□ 3.6
Ssx2ip-202ENSMUST00000106149 Supt5hO55201 1082 aaKnown RBP37.53■■■■□ 3.6
Ssx2ip-202ENSMUST00000106149 NefmP08553 848 aa37.52■■■■□ 3.6
Ssx2ip-202ENSMUST00000106149 Kif15Q6P9L6 1387 aa37.48■■■■□ 3.59
Ssx2ip-202ENSMUST00000106149 Camsap1A2AHC3 1581 aa37.34■■■■□ 3.57
Ssx2ip-202ENSMUST00000106149 NrkQ9R0G8 1455 aa37.33■■■■□ 3.57
Ssx2ip-202ENSMUST00000106149 PtprkP35822 1457 aa37.32■■■■□ 3.57
Ssx2ip-202ENSMUST00000106149 Arhgap35Q91YM2 1499 aa37.29■■■■□ 3.56
Ssx2ip-202ENSMUST00000106149 UbtfP25976 765 aaKnown RBP37.27■■■■□ 3.56
Ssx2ip-202ENSMUST00000106149 Il27Q8K3I6 234 aa37.23■■■■□ 3.55
Ssx2ip-202ENSMUST00000106149 Zeb1Q64318 1117 aa37.21■■■■□ 3.55
Ssx2ip-202ENSMUST00000106149 Thoc2B1AZI6 1594 aaKnown RBP37.21■■■■□ 3.55
Ssx2ip-202ENSMUST00000106149 Clip1Q922J3 1391 aa37.21■■■■□ 3.55
Ssx2ip-202ENSMUST00000106149 Shroom4Q1W617 1475 aa37.19■■■■□ 3.54
Ssx2ip-202ENSMUST00000106149 Phldb1Q6PDH0 1371 aaKnown RBP37.14■■■■□ 3.54
Ssx2ip-202ENSMUST00000106149 Ccdc18Q640L5 1455 aa37.14■■■■□ 3.54
Ssx2ip-202ENSMUST00000106149 Grin2bQ01097 1482 aa37.07■■■■□ 3.52
Ssx2ip-202ENSMUST00000106149 Map3k1P53349 1493 aa37.03■■■■□ 3.52
Ssx2ip-202ENSMUST00000106149 Eea1Q8BL66 1411 aa36.92■■■■□ 3.5
Ssx2ip-202ENSMUST00000106149 Plekhg3Q4VAC9 1341 aa36.91■■■■□ 3.5
Ssx2ip-202ENSMUST00000106149 Cux2P70298 1426 aa36.9■■■■□ 3.5
Ssx2ip-202ENSMUST00000106149 Arap1Q4LDD4 1452 aa36.86■■■■□ 3.49
Ssx2ip-202ENSMUST00000106149 Fam135aQ6NS59 1506 aa36.84■■■■□ 3.49
Ssx2ip-202ENSMUST00000106149 Mroh2bQ7M6Y6 1581 aa36.83■■■■□ 3.49
Ssx2ip-202ENSMUST00000106149 Ubl4bQ9CQ84 188 aa36.83■■■■□ 3.49
Ssx2ip-202ENSMUST00000106149 Setd5Q5XJV7 1441 aa36.75■■■■□ 3.47
Ssx2ip-202ENSMUST00000106149 Baz1bQ9Z277 1479 aa36.74■■■■□ 3.47
Ssx2ip-202ENSMUST00000106149 Arhgef5E9Q7D5 1581 aa36.74■■■■□ 3.47
Ssx2ip-202ENSMUST00000106149 Npm1Q61937 292 aaKnown RBP36.69■■■■□ 3.46
Ssx2ip-202ENSMUST00000106149 Ncapd3Q6ZQK0 1506 aa36.67■■■■□ 3.46
Ssx2ip-202ENSMUST00000106149 Sall2Q9QX96 1004 aa36.66■■■■□ 3.46
Ssx2ip-202ENSMUST00000106149 AqrQ8CFQ3 1481 aaKnown RBP36.66■■■■□ 3.46
Ssx2ip-202ENSMUST00000106149 Efcab5A0JP43 1406 aa36.62■■■■□ 3.45
Ssx2ip-202ENSMUST00000106149 LrpprcQ6PB66 1392 aaKnown RBP36.61■■■■□ 3.45
Ssx2ip-202ENSMUST00000106149 Erich3F6QRE9 1637 aa36.59■■■■□ 3.45
Ssx2ip-202ENSMUST00000106149 Ap3b1Q9Z1T1 1105 aa36.57■■■■□ 3.45
Ssx2ip-202ENSMUST00000106149 PogzQ8BZH4 1409 aaKnown RBP36.57■■■■□ 3.44
Ssx2ip-202ENSMUST00000106149 Ankrd26Q811D2 1581 aa36.57■■■■□ 3.44
Ssx2ip-202ENSMUST00000106149 Las1lA2BE28 776 aaKnown RBP36.54■■■■□ 3.44
Ssx2ip-202ENSMUST00000106149 Tiam1Q60610 1591 aa36.51■■■■□ 3.44
Ssx2ip-202ENSMUST00000106149 Duox2A2AQ99 1517 aa36.51■■■■□ 3.43
Ssx2ip-202ENSMUST00000106149 Neurod1Q60867 357 aa36.47■■■■□ 3.43
Ssx2ip-202ENSMUST00000106149 Carmil1Q6EDY6 1374 aa36.43■■■■□ 3.42
Retrieved 100 of 22,080 RNA–protein pairs in 163 ms