Protein–RNA interactions for Protein: Q8BGN5

Nipal3, NIPA-like protein 3, mousemouse

Predictions only

Length 410 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipal3Q8BGN5 Mipep-204ENSMUST00000225043 1548 ntBASIC24.5■■□□□ 1.51
Nipal3Q8BGN5 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC24.49■■□□□ 1.51
Nipal3Q8BGN5 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.44■■□□□ 1.5
Nipal3Q8BGN5 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
Nipal3Q8BGN5 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.42■■□□□ 1.5
Nipal3Q8BGN5 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
Nipal3Q8BGN5 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC24.39■■□□□ 1.49
Nipal3Q8BGN5 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
Nipal3Q8BGN5 AC153504.1-201ENSMUST00000218379 2290 ntBASIC24.37■■□□□ 1.49
Nipal3Q8BGN5 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Nipal3Q8BGN5 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
Nipal3Q8BGN5 Frs3-201ENSMUST00000113296 2144 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.49
Nipal3Q8BGN5 Gm24804-201ENSMUST00000174982 85 ntBASIC24.31■■□□□ 1.48
Nipal3Q8BGN5 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC24.3■■□□□ 1.48
Nipal3Q8BGN5 E2f4-201ENSMUST00000015003 1993 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
Nipal3Q8BGN5 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC24.3■■□□□ 1.48
Nipal3Q8BGN5 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.29■■□□□ 1.48
Nipal3Q8BGN5 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.28■■□□□ 1.48
Nipal3Q8BGN5 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
Nipal3Q8BGN5 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.28■■□□□ 1.48
Nipal3Q8BGN5 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.26■■□□□ 1.47
Nipal3Q8BGN5 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.25■■□□□ 1.47
Nipal3Q8BGN5 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
Nipal3Q8BGN5 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.22■■□□□ 1.47
Nipal3Q8BGN5 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
Nipal3Q8BGN5 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Nipal3Q8BGN5 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Nipal3Q8BGN5 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
Nipal3Q8BGN5 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC24.18■■□□□ 1.46
Nipal3Q8BGN5 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Nipal3Q8BGN5 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Nipal3Q8BGN5 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.16■■□□□ 1.46
Nipal3Q8BGN5 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.15■■□□□ 1.46
Nipal3Q8BGN5 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC24.14■■□□□ 1.45
Nipal3Q8BGN5 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Nipal3Q8BGN5 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Nipal3Q8BGN5 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC24.14■■□□□ 1.45
Nipal3Q8BGN5 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
Nipal3Q8BGN5 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Nipal3Q8BGN5 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Nipal3Q8BGN5 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Nipal3Q8BGN5 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.05■■□□□ 1.44
Nipal3Q8BGN5 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Nipal3Q8BGN5 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
Nipal3Q8BGN5 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Nipal3Q8BGN5 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
Nipal3Q8BGN5 Peli2-204ENSMUST00000226513 1320 ntBASIC24.04■■□□□ 1.44
Nipal3Q8BGN5 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Nipal3Q8BGN5 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
Nipal3Q8BGN5 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC24.02■■□□□ 1.44
Nipal3Q8BGN5 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Nipal3Q8BGN5 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Nipal3Q8BGN5 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Nipal3Q8BGN5 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC24■■□□□ 1.43
Nipal3Q8BGN5 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Nipal3Q8BGN5 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
Nipal3Q8BGN5 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Nipal3Q8BGN5 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Nipal3Q8BGN5 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.96■■□□□ 1.43
Nipal3Q8BGN5 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.95■■□□□ 1.42
Nipal3Q8BGN5 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Nipal3Q8BGN5 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Nipal3Q8BGN5 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.93■■□□□ 1.42
Nipal3Q8BGN5 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Nipal3Q8BGN5 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.92■■□□□ 1.42
Nipal3Q8BGN5 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Nipal3Q8BGN5 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.91■■□□□ 1.42
Nipal3Q8BGN5 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Nipal3Q8BGN5 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.9■■□□□ 1.42
Nipal3Q8BGN5 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.42
Nipal3Q8BGN5 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.88■■□□□ 1.41
Nipal3Q8BGN5 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
Nipal3Q8BGN5 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Nipal3Q8BGN5 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Nipal3Q8BGN5 Gm16148-201ENSMUST00000119653 893 ntBASIC23.85■■□□□ 1.41
Nipal3Q8BGN5 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
Nipal3Q8BGN5 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nipal3Q8BGN5 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nipal3Q8BGN5 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Nipal3Q8BGN5 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC23.84■■□□□ 1.41
Nipal3Q8BGN5 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
Nipal3Q8BGN5 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Nipal3Q8BGN5 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
Nipal3Q8BGN5 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
Nipal3Q8BGN5 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
Nipal3Q8BGN5 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
Nipal3Q8BGN5 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Nipal3Q8BGN5 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.73■■□□□ 1.39
Nipal3Q8BGN5 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.73■■□□□ 1.39
Nipal3Q8BGN5 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.73■■□□□ 1.39
Nipal3Q8BGN5 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC23.72■■□□□ 1.39
Nipal3Q8BGN5 Zxda-201ENSMUST00000117281 2621 ntBASIC23.71■■□□□ 1.39
Nipal3Q8BGN5 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
Nipal3Q8BGN5 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Nipal3Q8BGN5 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
Nipal3Q8BGN5 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.7■■□□□ 1.38
Nipal3Q8BGN5 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nipal3Q8BGN5 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
Nipal3Q8BGN5 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Nipal3Q8BGN5 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms