Protein–RNA interactions for Protein: Q6PDH4

Ranbp3l, Ran-binding protein 3-like, mousemouse

Predictions only

Length 491 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ranbp3lQ6PDH4 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Ranbp3lQ6PDH4 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC23■■□□□ 1.27
Ranbp3lQ6PDH4 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.98■■□□□ 1.27
Ranbp3lQ6PDH4 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC22.97■■□□□ 1.27
Ranbp3lQ6PDH4 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC22.96■■□□□ 1.27
Ranbp3lQ6PDH4 AL845457.1-201ENSMUST00000197244 68 ntBASIC22.94■■□□□ 1.26
Ranbp3lQ6PDH4 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC22.93■■□□□ 1.26
Ranbp3lQ6PDH4 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ranbp3lQ6PDH4 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ranbp3lQ6PDH4 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Ranbp3lQ6PDH4 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Ranbp3lQ6PDH4 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Ranbp3lQ6PDH4 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC22.85■■□□□ 1.25
Ranbp3lQ6PDH4 Mipep-204ENSMUST00000225043 1548 ntBASIC22.84■■□□□ 1.25
Ranbp3lQ6PDH4 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
Ranbp3lQ6PDH4 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC22.83■■□□□ 1.25
Ranbp3lQ6PDH4 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.24
Ranbp3lQ6PDH4 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ranbp3lQ6PDH4 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
Ranbp3lQ6PDH4 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ranbp3lQ6PDH4 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC22.79■■□□□ 1.24
Ranbp3lQ6PDH4 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Ranbp3lQ6PDH4 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC22.75■■□□□ 1.23
Ranbp3lQ6PDH4 Gm6206-201ENSMUST00000133472 2199 ntBASIC22.74■■□□□ 1.23
Ranbp3lQ6PDH4 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ranbp3lQ6PDH4 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Ranbp3lQ6PDH4 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Ranbp3lQ6PDH4 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.73■■□□□ 1.23
Ranbp3lQ6PDH4 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC22.72■■□□□ 1.23
Ranbp3lQ6PDH4 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.72■■□□□ 1.23
Ranbp3lQ6PDH4 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC22.72■■□□□ 1.23
Ranbp3lQ6PDH4 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
Ranbp3lQ6PDH4 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC22.7■■□□□ 1.23
Ranbp3lQ6PDH4 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Ranbp3lQ6PDH4 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Ranbp3lQ6PDH4 Gm9905-201ENSMUST00000065740 1845 ntBASIC22.69■■□□□ 1.22
Ranbp3lQ6PDH4 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ranbp3lQ6PDH4 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Ranbp3lQ6PDH4 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.66■■□□□ 1.22
Ranbp3lQ6PDH4 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Ranbp3lQ6PDH4 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC22.65■■□□□ 1.22
Ranbp3lQ6PDH4 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.64■■□□□ 1.21
Ranbp3lQ6PDH4 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC22.62■■□□□ 1.21
Ranbp3lQ6PDH4 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ranbp3lQ6PDH4 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
Ranbp3lQ6PDH4 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Ranbp3lQ6PDH4 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ranbp3lQ6PDH4 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC22.61■■□□□ 1.21
Ranbp3lQ6PDH4 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Ranbp3lQ6PDH4 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ranbp3lQ6PDH4 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.59■■□□□ 1.21
Ranbp3lQ6PDH4 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Ranbp3lQ6PDH4 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Ranbp3lQ6PDH4 Gm17082-201ENSMUST00000166043 1091 ntBASIC22.57■■□□□ 1.2
Ranbp3lQ6PDH4 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.57■■□□□ 1.2
Ranbp3lQ6PDH4 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC22.57■■□□□ 1.2
Ranbp3lQ6PDH4 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Ranbp3lQ6PDH4 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC22.55■■□□□ 1.2
Ranbp3lQ6PDH4 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Ranbp3lQ6PDH4 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Ranbp3lQ6PDH4 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC22.54■■□□□ 1.2
Ranbp3lQ6PDH4 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Ranbp3lQ6PDH4 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ranbp3lQ6PDH4 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ranbp3lQ6PDH4 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
Ranbp3lQ6PDH4 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ranbp3lQ6PDH4 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ranbp3lQ6PDH4 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC22.51■■□□□ 1.19
Ranbp3lQ6PDH4 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Ranbp3lQ6PDH4 Gm27322-201ENSMUST00000184007 104 ntBASIC22.51■■□□□ 1.19
Ranbp3lQ6PDH4 AC166822.3-201ENSMUST00000227394 661 ntBASIC22.51■■□□□ 1.19
Ranbp3lQ6PDH4 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Ranbp3lQ6PDH4 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC22.49■■□□□ 1.19
Ranbp3lQ6PDH4 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Ranbp3lQ6PDH4 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC22.49■■□□□ 1.19
Ranbp3lQ6PDH4 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC22.49■■□□□ 1.19
Ranbp3lQ6PDH4 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.48■■□□□ 1.19
Ranbp3lQ6PDH4 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Ranbp3lQ6PDH4 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
Ranbp3lQ6PDH4 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.47■■□□□ 1.19
Ranbp3lQ6PDH4 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ranbp3lQ6PDH4 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Ranbp3lQ6PDH4 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC22.46■■□□□ 1.19
Ranbp3lQ6PDH4 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC22.45■■□□□ 1.18
Ranbp3lQ6PDH4 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
Ranbp3lQ6PDH4 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
Ranbp3lQ6PDH4 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ranbp3lQ6PDH4 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Ranbp3lQ6PDH4 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Ranbp3lQ6PDH4 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC22.4■■□□□ 1.18
Ranbp3lQ6PDH4 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ranbp3lQ6PDH4 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Ranbp3lQ6PDH4 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ranbp3lQ6PDH4 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Ranbp3lQ6PDH4 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Ranbp3lQ6PDH4 Gm43445-201ENSMUST00000198564 2091 ntBASIC22.37■■□□□ 1.17
Ranbp3lQ6PDH4 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Ranbp3lQ6PDH4 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Ranbp3lQ6PDH4 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Ranbp3lQ6PDH4 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms