Protein–RNA interactions for Protein: Q64221

Nhlh2, Helix-loop-helix protein 2, mousemouse

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlh2Q64221 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Nhlh2Q64221 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Nhlh2Q64221 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.1■□□□□ 0.97
Nhlh2Q64221 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.09■□□□□ 0.97
Nhlh2Q64221 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC21.09■□□□□ 0.97
Nhlh2Q64221 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Nhlh2Q64221 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Nhlh2Q64221 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Nhlh2Q64221 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Nhlh2Q64221 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nhlh2Q64221 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Nhlh2Q64221 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nhlh2Q64221 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Nhlh2Q64221 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Nhlh2Q64221 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
Nhlh2Q64221 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
Nhlh2Q64221 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
Nhlh2Q64221 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nhlh2Q64221 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nhlh2Q64221 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nhlh2Q64221 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Nhlh2Q64221 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Nhlh2Q64221 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
Nhlh2Q64221 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Nhlh2Q64221 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Nhlh2Q64221 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC20.99■□□□□ 0.95
Nhlh2Q64221 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nhlh2Q64221 AL845457.1-201ENSMUST00000197244 68 ntBASIC20.97■□□□□ 0.95
Nhlh2Q64221 Mipep-204ENSMUST00000225043 1548 ntBASIC20.97■□□□□ 0.95
Nhlh2Q64221 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Nhlh2Q64221 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.95■□□□□ 0.94
Nhlh2Q64221 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Nhlh2Q64221 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Nhlh2Q64221 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Nhlh2Q64221 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC20.9■□□□□ 0.94
Nhlh2Q64221 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nhlh2Q64221 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Nhlh2Q64221 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Nhlh2Q64221 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
Nhlh2Q64221 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
Nhlh2Q64221 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
Nhlh2Q64221 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nhlh2Q64221 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nhlh2Q64221 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Nhlh2Q64221 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Nhlh2Q64221 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nhlh2Q64221 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Nhlh2Q64221 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nhlh2Q64221 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nhlh2Q64221 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
Nhlh2Q64221 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nhlh2Q64221 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Nhlh2Q64221 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
Nhlh2Q64221 Gm9905-201ENSMUST00000065740 1845 ntBASIC20.79■□□□□ 0.92
Nhlh2Q64221 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
Nhlh2Q64221 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
Nhlh2Q64221 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
Nhlh2Q64221 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC20.76■□□□□ 0.91
Nhlh2Q64221 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC20.76■□□□□ 0.91
Nhlh2Q64221 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Nhlh2Q64221 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.76■□□□□ 0.91
Nhlh2Q64221 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Nhlh2Q64221 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Nhlh2Q64221 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
Nhlh2Q64221 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Nhlh2Q64221 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Nhlh2Q64221 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Nhlh2Q64221 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Nhlh2Q64221 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
Nhlh2Q64221 Gm25262-201ENSMUST00000174934 133 ntBASIC20.69■□□□□ 0.9
Nhlh2Q64221 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
Nhlh2Q64221 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Nhlh2Q64221 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
Nhlh2Q64221 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
Nhlh2Q64221 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.89
Nhlh2Q64221 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
Nhlh2Q64221 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Nhlh2Q64221 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Nhlh2Q64221 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Nhlh2Q64221 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
Nhlh2Q64221 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Nhlh2Q64221 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Nhlh2Q64221 Raly-201ENSMUST00000029120 1802 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Nhlh2Q64221 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.59■□□□□ 0.89
Nhlh2Q64221 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nhlh2Q64221 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nhlh2Q64221 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Nhlh2Q64221 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC20.57■□□□□ 0.88
Nhlh2Q64221 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
Nhlh2Q64221 Pfdn2-202ENSMUST00000135941 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Nhlh2Q64221 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nhlh2Q64221 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nhlh2Q64221 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nhlh2Q64221 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Nhlh2Q64221 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
Nhlh2Q64221 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nhlh2Q64221 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
Nhlh2Q64221 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC20.51■□□□□ 0.87
Nhlh2Q64221 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Nhlh2Q64221 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC20.5■□□□□ 0.87
Retrieved 100 of 76,532 protein–RNA pairs in 17.8 ms