Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.55■■□□□ 1.04
SspnQ62147 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.53■■□□□ 1.04
SspnQ62147 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC21.53■■□□□ 1.04
SspnQ62147 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC21.52■■□□□ 1.04
SspnQ62147 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
SspnQ62147 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
SspnQ62147 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.5■■□□□ 1.03
SspnQ62147 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SspnQ62147 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SspnQ62147 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SspnQ62147 Gm17082-201ENSMUST00000166043 1091 ntBASIC21.48■■□□□ 1.03
SspnQ62147 Gm27322-201ENSMUST00000184007 104 ntBASIC21.47■■□□□ 1.03
SspnQ62147 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC21.46■■□□□ 1.03
SspnQ62147 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SspnQ62147 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SspnQ62147 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SspnQ62147 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SspnQ62147 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SspnQ62147 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SspnQ62147 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
SspnQ62147 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
SspnQ62147 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC21.37■■□□□ 1.01
SspnQ62147 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
SspnQ62147 AC166822.3-201ENSMUST00000227394 661 ntBASIC21.36■■□□□ 1.01
SspnQ62147 AC153504.1-201ENSMUST00000218379 2290 ntBASIC21.35■■□□□ 1.01
SspnQ62147 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
SspnQ62147 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SspnQ62147 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SspnQ62147 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC21.29■■□□□ 1
SspnQ62147 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SspnQ62147 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SspnQ62147 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.28■■□□□ 1
SspnQ62147 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC21.28■■□□□ 1
SspnQ62147 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.28■■□□□ 1
SspnQ62147 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC21.28■■□□□ 1
SspnQ62147 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.27■■□□□ 1
SspnQ62147 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.27■□□□□ 0.99
SspnQ62147 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SspnQ62147 Gm26115-201ENSMUST00000175605 87 ntBASIC21.26■□□□□ 0.99
SspnQ62147 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SspnQ62147 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
SspnQ62147 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SspnQ62147 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC21.25■□□□□ 0.99
SspnQ62147 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SspnQ62147 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SspnQ62147 Gm8109-201ENSMUST00000194076 746 ntBASIC21.22■□□□□ 0.99
SspnQ62147 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
SspnQ62147 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.22■□□□□ 0.99
SspnQ62147 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
SspnQ62147 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
SspnQ62147 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.99
SspnQ62147 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
SspnQ62147 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.2■□□□□ 0.98
SspnQ62147 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
SspnQ62147 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.19■□□□□ 0.98
SspnQ62147 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
SspnQ62147 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.18■□□□□ 0.98
SspnQ62147 Ccdc9-202ENSMUST00000118976 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
SspnQ62147 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
SspnQ62147 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SspnQ62147 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.16■□□□□ 0.98
SspnQ62147 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
SspnQ62147 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
SspnQ62147 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.12■□□□□ 0.97
SspnQ62147 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SspnQ62147 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
SspnQ62147 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
SspnQ62147 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
SspnQ62147 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
SspnQ62147 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SspnQ62147 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SspnQ62147 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
SspnQ62147 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
SspnQ62147 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
SspnQ62147 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
SspnQ62147 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SspnQ62147 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
SspnQ62147 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
SspnQ62147 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
SspnQ62147 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
SspnQ62147 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SspnQ62147 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SspnQ62147 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SspnQ62147 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SspnQ62147 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SspnQ62147 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SspnQ62147 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SspnQ62147 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SspnQ62147 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.95
SspnQ62147 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.95■□□□□ 0.95
SspnQ62147 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
SspnQ62147 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.95■□□□□ 0.94
SspnQ62147 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
SspnQ62147 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
SspnQ62147 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
SspnQ62147 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
SspnQ62147 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
SspnQ62147 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
SspnQ62147 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
SspnQ62147 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.91■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms