Protein–RNA interactions for Protein: Q61909

Runx1t1, Protein CBFA2T1, mousemouse

Predictions only

Length 577 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx1t1Q61909 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.56■■□□□ 1.52
Runx1t1Q61909 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Runx1t1Q61909 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Runx1t1Q61909 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Runx1t1Q61909 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Runx1t1Q61909 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.53■■□□□ 1.52
Runx1t1Q61909 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
Runx1t1Q61909 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.52■■□□□ 1.52
Runx1t1Q61909 Gm27322-201ENSMUST00000184007 104 ntBASIC24.52■■□□□ 1.52
Runx1t1Q61909 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Runx1t1Q61909 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Runx1t1Q61909 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Runx1t1Q61909 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Runx1t1Q61909 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.5■■□□□ 1.51
Runx1t1Q61909 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Runx1t1Q61909 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
Runx1t1Q61909 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Runx1t1Q61909 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Runx1t1Q61909 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.47■■□□□ 1.51
Runx1t1Q61909 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Runx1t1Q61909 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Runx1t1Q61909 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Runx1t1Q61909 Gm26115-201ENSMUST00000175605 87 ntBASIC24.43■■□□□ 1.5
Runx1t1Q61909 Gm8109-201ENSMUST00000194076 746 ntBASIC24.42■■□□□ 1.5
Runx1t1Q61909 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
Runx1t1Q61909 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.39■■□□□ 1.49
Runx1t1Q61909 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Runx1t1Q61909 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.38■■□□□ 1.49
Runx1t1Q61909 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Runx1t1Q61909 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.36■■□□□ 1.49
Runx1t1Q61909 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Runx1t1Q61909 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Runx1t1Q61909 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Runx1t1Q61909 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Runx1t1Q61909 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Runx1t1Q61909 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Runx1t1Q61909 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Runx1t1Q61909 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Runx1t1Q61909 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Runx1t1Q61909 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Runx1t1Q61909 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
Runx1t1Q61909 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Runx1t1Q61909 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Runx1t1Q61909 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
Runx1t1Q61909 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Runx1t1Q61909 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Runx1t1Q61909 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Runx1t1Q61909 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Runx1t1Q61909 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Runx1t1Q61909 Zxda-201ENSMUST00000117281 2621 ntBASIC24.15■■□□□ 1.46
Runx1t1Q61909 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Runx1t1Q61909 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Runx1t1Q61909 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Runx1t1Q61909 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Runx1t1Q61909 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Runx1t1Q61909 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Runx1t1Q61909 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Runx1t1Q61909 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Runx1t1Q61909 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Runx1t1Q61909 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
Runx1t1Q61909 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
Runx1t1Q61909 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Runx1t1Q61909 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Runx1t1Q61909 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Runx1t1Q61909 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Runx1t1Q61909 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Runx1t1Q61909 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Runx1t1Q61909 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Runx1t1Q61909 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Runx1t1Q61909 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Runx1t1Q61909 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Runx1t1Q61909 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Runx1t1Q61909 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Runx1t1Q61909 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Runx1t1Q61909 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Runx1t1Q61909 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24■■□□□ 1.43
Runx1t1Q61909 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Runx1t1Q61909 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Runx1t1Q61909 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Runx1t1Q61909 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Runx1t1Q61909 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.97■■□□□ 1.43
Runx1t1Q61909 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.95■■□□□ 1.42
Runx1t1Q61909 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Runx1t1Q61909 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Runx1t1Q61909 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Runx1t1Q61909 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Runx1t1Q61909 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Runx1t1Q61909 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Runx1t1Q61909 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Runx1t1Q61909 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.92■■□□□ 1.42
Runx1t1Q61909 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Runx1t1Q61909 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.91■■□□□ 1.42
Runx1t1Q61909 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Runx1t1Q61909 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Runx1t1Q61909 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.9■■□□□ 1.42
Runx1t1Q61909 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Runx1t1Q61909 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Runx1t1Q61909 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.88■■□□□ 1.41
Runx1t1Q61909 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Runx1t1Q61909 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms