Protein–RNA interactions for Protein: Q61909

Runx1t1, Protein CBFA2T1, mousemouse

Predictions only

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Runx1t1Q61909 Gm2415-204ENSMUST00000190235 2004 ntBASIC24.56■■□□□ 1.52
Runx1t1Q61909 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
Runx1t1Q61909 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC24.54■■□□□ 1.52
Runx1t1Q61909 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC24.54■■□□□ 1.52
Runx1t1Q61909 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC24.54■■□□□ 1.52
Runx1t1Q61909 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC24.53■■□□□ 1.52
Runx1t1Q61909 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC24.53■■□□□ 1.52
Runx1t1Q61909 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC24.52■■□□□ 1.52
Runx1t1Q61909 Gm27322-201ENSMUST00000184007 104 ntBASIC24.52■■□□□ 1.52
Runx1t1Q61909 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.52■■□□□ 1.52
Runx1t1Q61909 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Runx1t1Q61909 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC24.51■■□□□ 1.51
Runx1t1Q61909 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC24.51■■□□□ 1.51
Runx1t1Q61909 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC24.5■■□□□ 1.51
Runx1t1Q61909 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC24.5■■□□□ 1.51
Runx1t1Q61909 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC24.49■■□□□ 1.51
Runx1t1Q61909 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
Runx1t1Q61909 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
Runx1t1Q61909 Gm8066-201ENSMUST00000197762 485 ntTSL 3 BASIC24.47■■□□□ 1.51
Runx1t1Q61909 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
Runx1t1Q61909 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC24.45■■□□□ 1.51
Runx1t1Q61909 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC24.45■■□□□ 1.5
Runx1t1Q61909 Gm26115-201ENSMUST00000175605 87 ntBASIC24.43■■□□□ 1.5
Runx1t1Q61909 Gm8109-201ENSMUST00000194076 746 ntBASIC24.42■■□□□ 1.5
Runx1t1Q61909 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC24.39■■□□□ 1.5
Runx1t1Q61909 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC24.39■■□□□ 1.49
Runx1t1Q61909 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
Runx1t1Q61909 AC166822.3-201ENSMUST00000227394 661 ntBASIC24.38■■□□□ 1.49
Runx1t1Q61909 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
Runx1t1Q61909 Gm6658-202ENSMUST00000209493 1885 ntBASIC24.36■■□□□ 1.49
Runx1t1Q61909 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
Runx1t1Q61909 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC24.33■■□□□ 1.49
Runx1t1Q61909 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC24.33■■□□□ 1.49
Runx1t1Q61909 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC24.29■■□□□ 1.48
Runx1t1Q61909 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC24.29■■□□□ 1.48
Runx1t1Q61909 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
Runx1t1Q61909 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC24.22■■□□□ 1.47
Runx1t1Q61909 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
Runx1t1Q61909 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC24.21■■□□□ 1.47
Runx1t1Q61909 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
Runx1t1Q61909 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC24.2■■□□□ 1.47
Runx1t1Q61909 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC24.19■■□□□ 1.46
Runx1t1Q61909 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
Runx1t1Q61909 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
Runx1t1Q61909 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
Runx1t1Q61909 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
Runx1t1Q61909 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Runx1t1Q61909 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
Runx1t1Q61909 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
Runx1t1Q61909 Zxda-201ENSMUST00000117281 2621 ntBASIC24.15■■□□□ 1.46
Runx1t1Q61909 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC24.13■■□□□ 1.45
Runx1t1Q61909 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Runx1t1Q61909 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Runx1t1Q61909 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Runx1t1Q61909 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC24.12■■□□□ 1.45
Runx1t1Q61909 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC24.12■■□□□ 1.45
Runx1t1Q61909 Hexdc-202ENSMUST00000106117 2149 ntAPPRIS P2 TSL 1 (best) BASIC24.11■■□□□ 1.45
Runx1t1Q61909 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
Runx1t1Q61909 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
Runx1t1Q61909 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC24.08■■□□□ 1.45
Runx1t1Q61909 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC24.08■■□□□ 1.44
Runx1t1Q61909 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Runx1t1Q61909 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Runx1t1Q61909 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
Runx1t1Q61909 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
Runx1t1Q61909 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Runx1t1Q61909 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
Runx1t1Q61909 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Runx1t1Q61909 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Runx1t1Q61909 Adap1-201ENSMUST00000110865 2557 ntAPPRIS P1 TSL 5 BASIC24.01■■□□□ 1.43
Runx1t1Q61909 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Runx1t1Q61909 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Runx1t1Q61909 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Runx1t1Q61909 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
Runx1t1Q61909 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Runx1t1Q61909 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC24■■□□□ 1.43
Runx1t1Q61909 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Runx1t1Q61909 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
Runx1t1Q61909 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
Runx1t1Q61909 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
Runx1t1Q61909 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.97■■□□□ 1.43
Runx1t1Q61909 Gm9905-201ENSMUST00000065740 1845 ntBASIC23.95■■□□□ 1.42
Runx1t1Q61909 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Runx1t1Q61909 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Runx1t1Q61909 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Runx1t1Q61909 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Runx1t1Q61909 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Runx1t1Q61909 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Runx1t1Q61909 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Runx1t1Q61909 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC23.92■■□□□ 1.42
Runx1t1Q61909 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
Runx1t1Q61909 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC23.91■■□□□ 1.42
Runx1t1Q61909 Rab40c-201ENSMUST00000026826 2466 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Runx1t1Q61909 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Runx1t1Q61909 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.9■■□□□ 1.42
Runx1t1Q61909 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Runx1t1Q61909 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Runx1t1Q61909 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC23.88■■□□□ 1.41
Runx1t1Q61909 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.87■■□□□ 1.41
Runx1t1Q61909 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Retrieved 100 of 76,532 protein–RNA pairs in 9.2 ms