Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Sdf4Q61112 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Sdf4Q61112 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC26.53■■□□□ 1.84
Sdf4Q61112 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC26.52■■□□□ 1.84
Sdf4Q61112 Gm2415-204ENSMUST00000190235 2004 ntBASIC26.5■■□□□ 1.83
Sdf4Q61112 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Sdf4Q61112 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Sdf4Q61112 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
Sdf4Q61112 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
Sdf4Q61112 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.44■■□□□ 1.82
Sdf4Q61112 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
Sdf4Q61112 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
Sdf4Q61112 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
Sdf4Q61112 Gm6658-202ENSMUST00000209493 1885 ntBASIC26.35■■□□□ 1.81
Sdf4Q61112 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC26.35■■□□□ 1.81
Sdf4Q61112 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
Sdf4Q61112 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
Sdf4Q61112 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC26.32■■□□□ 1.8
Sdf4Q61112 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
Sdf4Q61112 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
Sdf4Q61112 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
Sdf4Q61112 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
Sdf4Q61112 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC26.29■■□□□ 1.8
Sdf4Q61112 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
Sdf4Q61112 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC26.27■■□□□ 1.8
Sdf4Q61112 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Sdf4Q61112 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Sdf4Q61112 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Sdf4Q61112 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
Sdf4Q61112 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC26.25■■□□□ 1.79
Sdf4Q61112 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
Sdf4Q61112 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
Sdf4Q61112 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
Sdf4Q61112 Gm24804-201ENSMUST00000174982 85 ntBASIC26.23■■□□□ 1.79
Sdf4Q61112 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
Sdf4Q61112 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
Sdf4Q61112 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
Sdf4Q61112 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
Sdf4Q61112 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.2■■□□□ 1.79
Sdf4Q61112 Peli2-204ENSMUST00000226513 1320 ntBASIC26.16■■□□□ 1.78
Sdf4Q61112 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Sdf4Q61112 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Sdf4Q61112 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC26.14■■□□□ 1.77
Sdf4Q61112 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
Sdf4Q61112 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC26.11■■□□□ 1.77
Sdf4Q61112 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC26.11■■□□□ 1.77
Sdf4Q61112 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
Sdf4Q61112 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
Sdf4Q61112 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC26.08■■□□□ 1.77
Sdf4Q61112 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sdf4Q61112 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC26.07■■□□□ 1.76
Sdf4Q61112 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC26.07■■□□□ 1.76
Sdf4Q61112 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Sdf4Q61112 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
Sdf4Q61112 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sdf4Q61112 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Sdf4Q61112 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
Sdf4Q61112 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Sdf4Q61112 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC26■■□□□ 1.75
Sdf4Q61112 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Sdf4Q61112 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Sdf4Q61112 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Sdf4Q61112 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC25.94■■□□□ 1.74
Sdf4Q61112 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC25.93■■□□□ 1.74
Sdf4Q61112 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Sdf4Q61112 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC25.92■■□□□ 1.74
Sdf4Q61112 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC25.91■■□□□ 1.74
Sdf4Q61112 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC25.9■■□□□ 1.74
Sdf4Q61112 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
Sdf4Q61112 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Sdf4Q61112 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC25.88■■□□□ 1.73
Sdf4Q61112 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC25.88■■□□□ 1.73
Sdf4Q61112 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Sdf4Q61112 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Sdf4Q61112 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Sdf4Q61112 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Sdf4Q61112 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC25.87■■□□□ 1.73
Sdf4Q61112 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Sdf4Q61112 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC25.86■■□□□ 1.73
Sdf4Q61112 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC25.86■■□□□ 1.73
Sdf4Q61112 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
Sdf4Q61112 Gm16148-201ENSMUST00000119653 893 ntBASIC25.85■■□□□ 1.73
Sdf4Q61112 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Sdf4Q61112 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
Sdf4Q61112 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC25.82■■□□□ 1.72
Sdf4Q61112 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Sdf4Q61112 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sdf4Q61112 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Sdf4Q61112 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
Sdf4Q61112 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC25.81■■□□□ 1.72
Sdf4Q61112 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC25.81■■□□□ 1.72
Sdf4Q61112 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
Sdf4Q61112 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC25.8■■□□□ 1.72
Sdf4Q61112 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Sdf4Q61112 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
Sdf4Q61112 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Sdf4Q61112 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC25.76■■□□□ 1.71
Sdf4Q61112 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Sdf4Q61112 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Sdf4Q61112 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 8.6 ms