Protein–RNA interactions for Protein: Q3UTQ8

Cdkl5, Cyclin-dependent kinase-like 5, mousemouse

Predictions only

Length 938 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkl5Q3UTQ8 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC30.46■■■□□ 2.47
Cdkl5Q3UTQ8 Zxdb-201ENSMUST00000101388 5619 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
Cdkl5Q3UTQ8 Gm6658-202ENSMUST00000209493 1885 ntBASIC30.44■■■□□ 2.46
Cdkl5Q3UTQ8 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC30.43■■■□□ 2.46
Cdkl5Q3UTQ8 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC30.4■■■□□ 2.46
Cdkl5Q3UTQ8 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC30.38■■■□□ 2.45
Cdkl5Q3UTQ8 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC30.38■■■□□ 2.45
Cdkl5Q3UTQ8 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC30.35■■■□□ 2.45
Cdkl5Q3UTQ8 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC30.35■■■□□ 2.45
Cdkl5Q3UTQ8 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC30.35■■■□□ 2.45
Cdkl5Q3UTQ8 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC30.33■■■□□ 2.45
Cdkl5Q3UTQ8 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Cdkl5Q3UTQ8 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Cdkl5Q3UTQ8 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC30.32■■■□□ 2.44
Cdkl5Q3UTQ8 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC30.3■■■□□ 2.44
Cdkl5Q3UTQ8 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC30.3■■■□□ 2.44
Cdkl5Q3UTQ8 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC30.25■■■□□ 2.43
Cdkl5Q3UTQ8 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC30.24■■■□□ 2.43
Cdkl5Q3UTQ8 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC30.23■■■□□ 2.43
Cdkl5Q3UTQ8 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC30.23■■■□□ 2.43
Cdkl5Q3UTQ8 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC30.22■■■□□ 2.43
Cdkl5Q3UTQ8 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC30.18■■■□□ 2.42
Cdkl5Q3UTQ8 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC30.16■■■□□ 2.42
Cdkl5Q3UTQ8 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC30.15■■■□□ 2.42
Cdkl5Q3UTQ8 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC30.14■■■□□ 2.42
Cdkl5Q3UTQ8 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
Cdkl5Q3UTQ8 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
Cdkl5Q3UTQ8 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Cdkl5Q3UTQ8 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
Cdkl5Q3UTQ8 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Cdkl5Q3UTQ8 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
Cdkl5Q3UTQ8 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
Cdkl5Q3UTQ8 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC30.05■■■□□ 2.4
Cdkl5Q3UTQ8 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC30.03■■■□□ 2.4
Cdkl5Q3UTQ8 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
Cdkl5Q3UTQ8 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Cdkl5Q3UTQ8 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC30.01■■■□□ 2.39
Cdkl5Q3UTQ8 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Cdkl5Q3UTQ8 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC30.01■■■□□ 2.39
Cdkl5Q3UTQ8 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
Cdkl5Q3UTQ8 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
Cdkl5Q3UTQ8 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC29.98■■■□□ 2.39
Cdkl5Q3UTQ8 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC29.96■■■□□ 2.39
Cdkl5Q3UTQ8 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Cdkl5Q3UTQ8 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC29.94■■■□□ 2.38
Cdkl5Q3UTQ8 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC29.93■■■□□ 2.38
Cdkl5Q3UTQ8 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC29.93■■■□□ 2.38
Cdkl5Q3UTQ8 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.93■■■□□ 2.38
Cdkl5Q3UTQ8 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC29.92■■■□□ 2.38
Cdkl5Q3UTQ8 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC29.92■■■□□ 2.38
Cdkl5Q3UTQ8 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC29.91■■■□□ 2.38
Cdkl5Q3UTQ8 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC29.89■■■□□ 2.38
Cdkl5Q3UTQ8 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
Cdkl5Q3UTQ8 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC29.86■■■□□ 2.37
Cdkl5Q3UTQ8 Peli2-204ENSMUST00000226513 1320 ntBASIC29.86■■■□□ 2.37
Cdkl5Q3UTQ8 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC29.82■■■□□ 2.36
Cdkl5Q3UTQ8 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Cdkl5Q3UTQ8 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC29.81■■■□□ 2.36
Cdkl5Q3UTQ8 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Cdkl5Q3UTQ8 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC29.81■■■□□ 2.36
Cdkl5Q3UTQ8 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC29.8■■■□□ 2.36
Cdkl5Q3UTQ8 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC29.8■■■□□ 2.36
Cdkl5Q3UTQ8 Gm24804-201ENSMUST00000174982 85 ntBASIC29.79■■■□□ 2.36
Cdkl5Q3UTQ8 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC29.79■■■□□ 2.36
Cdkl5Q3UTQ8 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC29.76■■■□□ 2.36
Cdkl5Q3UTQ8 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
Cdkl5Q3UTQ8 AC153504.1-201ENSMUST00000218379 2290 ntBASIC29.76■■■□□ 2.35
Cdkl5Q3UTQ8 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC29.74■■■□□ 2.35
Cdkl5Q3UTQ8 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Cdkl5Q3UTQ8 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
Cdkl5Q3UTQ8 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC29.74■■■□□ 2.35
Cdkl5Q3UTQ8 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
Cdkl5Q3UTQ8 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC29.72■■■□□ 2.35
Cdkl5Q3UTQ8 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC29.7■■■□□ 2.35
Cdkl5Q3UTQ8 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC29.7■■■□□ 2.35
Cdkl5Q3UTQ8 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC29.69■■■□□ 2.34
Cdkl5Q3UTQ8 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
Cdkl5Q3UTQ8 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
Cdkl5Q3UTQ8 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Cdkl5Q3UTQ8 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
Cdkl5Q3UTQ8 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
Cdkl5Q3UTQ8 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC29.66■■■□□ 2.34
Cdkl5Q3UTQ8 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
Cdkl5Q3UTQ8 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
Cdkl5Q3UTQ8 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.33
Cdkl5Q3UTQ8 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC29.63■■■□□ 2.33
Cdkl5Q3UTQ8 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC29.62■■■□□ 2.33
Cdkl5Q3UTQ8 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC29.61■■■□□ 2.33
Cdkl5Q3UTQ8 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC29.61■■■□□ 2.33
Cdkl5Q3UTQ8 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC29.6■■■□□ 2.33
Cdkl5Q3UTQ8 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
Cdkl5Q3UTQ8 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Cdkl5Q3UTQ8 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Cdkl5Q3UTQ8 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
Cdkl5Q3UTQ8 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC29.54■■■□□ 2.32
Cdkl5Q3UTQ8 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
Cdkl5Q3UTQ8 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
Cdkl5Q3UTQ8 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC29.52■■■□□ 2.32
Cdkl5Q3UTQ8 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
Cdkl5Q3UTQ8 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC29.51■■■□□ 2.31
Retrieved 100 of 76,532 protein–RNA pairs in 11.4 ms