Protein–RNA interactions for Protein: Q12428

PDH1, Probable 2-methylcitrate dehydratase, yeastyeast

Known RBP Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PDH1Q12428 GAL1YBR020W 1587 nt11.07□□□□□ -0.64
PDH1Q12428 MSF1YPR047W 1410 nt11.06□□□□□ -0.64
PDH1Q12428 SIM1YIL123W 1431 nt11.03□□□□□ -0.64
PDH1Q12428 RRT12YCR045C 1476 nt11.02□□□□□ -0.65
PDH1Q12428 STB1YNL309W 1263 nt11.02□□□□□ -0.65
PDH1Q12428 TRM5YHR070W 1500 nt11.02□□□□□ -0.65
PDH1Q12428 THI74YDR438W 1113 nt11.01□□□□□ -0.65
PDH1Q12428 SPC25YER018C 666 nt11.01□□□□□ -0.65
PDH1Q12428 CCT4YDL143W 1587 nt11.01□□□□□ -0.65
PDH1Q12428 MIR1YJR077C 936 nt11□□□□□ -0.65
PDH1Q12428 YDR524C-BYDR524C-B 201 nt10.97□□□□□ -0.65
PDH1Q12428 VPS75YNL246W 795 nt10.96□□□□□ -0.65
PDH1Q12428 GPI16YHR188C 1833 nt10.95□□□□□ -0.66
PDH1Q12428 YMR244WYMR244W 1068 nt10.95□□□□□ -0.66
PDH1Q12428 DDR2YOL052C-A 186 nt10.94□□□□□ -0.66
PDH1Q12428 SWC5YBR231C 912 nt10.94□□□□□ -0.66
PDH1Q12428 VPS60YDR486C 690 nt10.91□□□□□ -0.66
PDH1Q12428 YFL067WYFL067W 528 nt10.91□□□□□ -0.66
PDH1Q12428 ATF2YGR177C 1608 nt10.9□□□□□ -0.66
PDH1Q12428 ERF2YLR246W 1080 nt10.88□□□□□ -0.67
PDH1Q12428 YHL050CYHL050C 2094 nt10.88□□□□□ -0.67
PDH1Q12428 DAT1YML113W 747 nt10.87□□□□□ -0.67
PDH1Q12428 YDL086C-AYDL086C-A 435 nt10.86□□□□□ -0.67
PDH1Q12428 ALG3YBL082C 1377 nt10.86□□□□□ -0.67
PDH1Q12428 GLR1YPL091W 1452 nt10.85□□□□□ -0.67
PDH1Q12428 SPT8YLR055C 1809 nt10.84□□□□□ -0.67
PDH1Q12428 PAU7YAR020C 168 nt10.84□□□□□ -0.67
PDH1Q12428 FEN2YCR028C 1539 nt10.84□□□□□ -0.67
PDH1Q12428 SEC11YIR022W 504 nt10.82□□□□□ -0.68
PDH1Q12428 PCH2YBR186W 1695 nt10.82□□□□□ -0.68
PDH1Q12428 ANP1YEL036C 1503 nt10.8□□□□□ -0.68
PDH1Q12428 YGL034CYGL034C 366 nt10.8□□□□□ -0.68
PDH1Q12428 CRR1YLR213C 1269 nt10.8□□□□□ -0.68
PDH1Q12428 GUT2YIL155C 1950 nt10.77□□□□□ -0.68
PDH1Q12428 UBA4YHR111W 1323 nt10.76□□□□□ -0.69
PDH1Q12428 YJL225CYJL225C 5277 nt10.75□□□□□ -0.69
PDH1Q12428 RBG2YGR173W 1107 nt10.74□□□□□ -0.69
PDH1Q12428 TIM17YJL143W 477 nt10.74□□□□□ -0.69
PDH1Q12428 YIR016WYIR016W 798 nt10.73□□□□□ -0.69
PDH1Q12428 SNG1YGR197C 1644 nt10.72□□□□□ -0.69
PDH1Q12428 SHB17YKR043C 816 nt10.71□□□□□ -0.69
PDH1Q12428 NDI1YML120C 1542 nt10.71□□□□□ -0.69
PDH1Q12428 HEM12YDR047W 1089 nt10.7□□□□□ -0.7
PDH1Q12428 YSR3YKR053C 1215 nt10.7□□□□□ -0.7
PDH1Q12428 NVJ2YPR091C 2313 nt10.67□□□□□ -0.7
PDH1Q12428 RBG1YAL036C 1110 nt10.66□□□□□ -0.7
PDH1Q12428 PAC11YDR488C 1602 nt10.66□□□□□ -0.7
PDH1Q12428 XYL2YLR070C 1071 nt10.65□□□□□ -0.7
PDH1Q12428 MIC10YCL057C-A 294 nt10.65□□□□□ -0.7
PDH1Q12428 PIB2YGL023C 1908 nt10.64□□□□□ -0.71
PDH1Q12428 SHM2YLR058C 1410 nt10.63□□□□□ -0.71
PDH1Q12428 YDR010CYDR010C 333 nt10.61□□□□□ -0.71
PDH1Q12428 LYS4YDR234W 2082 nt10.59□□□□□ -0.71
PDH1Q12428 NCP1YHR042W 2076 nt10.58□□□□□ -0.72
PDH1Q12428 XDJ1YLR090W 1380 nt10.57□□□□□ -0.72
PDH1Q12428 YCR087WYCR087W 516 nt10.57□□□□□ -0.72
PDH1Q12428 YMR226CYMR226C 804 nt10.57□□□□□ -0.72
PDH1Q12428 SGT2YOR007C 1041 nt10.56□□□□□ -0.72
PDH1Q12428 RTF1YGL244W 1677 nt10.56□□□□□ -0.72
PDH1Q12428 PHO89YBR296C 1725 nt10.55□□□□□ -0.72
PDH1Q12428 RET2YFR051C 1641 nt10.55□□□□□ -0.72
PDH1Q12428 AIM45YPR004C 1035 nt10.54□□□□□ -0.72
PDH1Q12428 NIT1YIL164C 600 nt10.53□□□□□ -0.72
PDH1Q12428 BNA2YJR078W 1362 nt10.52□□□□□ -0.73
PDH1Q12428 BOP3YNL042W 1191 nt10.5□□□□□ -0.73
PDH1Q12428 GDH3YAL062W 1374 nt10.5□□□□□ -0.73
PDH1Q12428 SAM1YLR180W 1149 nt10.48□□□□□ -0.73
PDH1Q12428 RDN37-1RDN37-1 5354 nt10.48□□□□□ -0.73
PDH1Q12428 RDN37-2RDN37-2 5354 nt10.48□□□□□ -0.73
PDH1Q12428 MIC12YBR262C 321 nt10.47□□□□□ -0.73
PDH1Q12428 MRP20YDR405W 792 nt10.45□□□□□ -0.74
PDH1Q12428 YHR056W-AYHR056W-A 435 nt10.43□□□□□ -0.74
PDH1Q12428 PTK1YKL198C 1989 nt10.43□□□□□ -0.74
PDH1Q12428 RPM1RPM1 483 nt10.42□□□□□ -0.74
PDH1Q12428 YGR201CYGR201C 678 nt10.4□□□□□ -0.74
PDH1Q12428 YLR111WYLR111W 333 nt10.39□□□□□ -0.75
PDH1Q12428 COQ2YNR041C 1119 nt10.39□□□□□ -0.75
PDH1Q12428 HHO1YPL127C 777 nt10.39□□□□□ -0.75
PDH1Q12428 RAX1YOR301W 1308 nt10.38□□□□□ -0.75
PDH1Q12428 AVT6YER119C 1347 nt10.34□□□□□ -0.75
PDH1Q12428 SFA1YDL168W 1161 nt10.31□□□□□ -0.76
PDH1Q12428 YCR102CYCR102C 1107 nt10.28□□□□□ -0.76
PDH1Q12428 RPL4BYDR012W 1089 nt10.28□□□□□ -0.76
PDH1Q12428 GOR1YNL274C 1053 nt10.28□□□□□ -0.76
PDH1Q12428 RPL4AYBR031W 1089 nt10.28□□□□□ -0.76
PDH1Q12428 RAD51YER095W 1203 nt10.27□□□□□ -0.77
PDH1Q12428 YHL019W-AYHL019W-A 594 nt10.26□□□□□ -0.77
PDH1Q12428 SDH5YOL071W 489 nt10.26□□□□□ -0.77
PDH1Q12428 CLB6YGR109C 1143 nt10.24□□□□□ -0.77
PDH1Q12428 RAD23YEL037C 1197 nt10.23□□□□□ -0.77
PDH1Q12428 YFL054CYFL054C 1941 nt10.22□□□□□ -0.77
PDH1Q12428 RPS14BYJL191W 417 nt10.21□□□□□ -0.77
PDH1Q12428 YLR437C-AYLR437C-A 228 nt10.18□□□□□ -0.78
PDH1Q12428 YNR029CYNR029C 1290 nt10.17□□□□□ -0.78
PDH1Q12428 STE4YOR212W 1272 nt10.17□□□□□ -0.78
PDH1Q12428 DUT1YBR252W 444 nt10.17□□□□□ -0.78
PDH1Q12428 UTH1YKR042W 1098 nt10.16□□□□□ -0.78
PDH1Q12428 FRE6YLL051C 2139 nt10.13□□□□□ -0.79
PDH1Q12428 TIR3YIL011W 810 nt10.12□□□□□ -0.79
PDH1Q12428 YLR349WYLR349W 507 nt10.12□□□□□ -0.79
Retrieved 100 of 7,029 protein–RNA pairs in 10.2 ms