Protein–RNA interactions for Protein: Q08723

RPN8, 26S proteasome regulatory subunit RPN8, yeastyeast

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPN8Q08723 PAU16YKL224C 372 nt10.87□□□□□ -0.67
RPN8Q08723 SWE1YJL187C 2460 nt10.86□□□□□ -0.67
RPN8Q08723 PCM1YEL058W 1674 nt10.85□□□□□ -0.67
RPN8Q08723 RNQ1YCL028W 1218 nt10.84□□□□□ -0.67
RPN8Q08723 TAD3YLR316C 969 nt10.82□□□□□ -0.68
RPN8Q08723 YIH1YCR059C 777 nt10.79□□□□□ -0.68
RPN8Q08723 AQY1YPR192W 918 nt10.77□□□□□ -0.69
RPN8Q08723 AHT1YHR093W 549 nt10.76□□□□□ -0.69
RPN8Q08723 SBA1YKL117W 651 nt10.72□□□□□ -0.69
RPN8Q08723 WSC2YNL283C 1512 nt10.71□□□□□ -0.69
RPN8Q08723 GLK1YCL040W 1503 nt10.71□□□□□ -0.69
RPN8Q08723 LYS4YDR234W 2082 nt10.69□□□□□ -0.7
RPN8Q08723 PRE6YOL038W 765 nt10.69□□□□□ -0.7
RPN8Q08723 PEX25YPL112C 1185 nt10.68□□□□□ -0.7
RPN8Q08723 NAT4YMR069W 858 nt10.67□□□□□ -0.7
RPN8Q08723 FTR1YER145C 1215 nt10.61□□□□□ -0.71
RPN8Q08723 YLL053CYLL053C 459 nt10.61□□□□□ -0.71
RPN8Q08723 YLR415CYLR415C 339 nt10.6□□□□□ -0.71
RPN8Q08723 FUR4YBR021W 1902 nt10.58□□□□□ -0.72
RPN8Q08723 BIO4YNR057C 714 nt10.57□□□□□ -0.72
RPN8Q08723 GAL1YBR020W 1587 nt10.56□□□□□ -0.72
RPN8Q08723 SIM1YIL123W 1431 nt10.56□□□□□ -0.72
RPN8Q08723 YSP3YOR003W 1437 nt10.56□□□□□ -0.72
RPN8Q08723 NAR1YNL240C 1476 nt10.55□□□□□ -0.72
RPN8Q08723 YFL066CYFL066C 1179 nt10.55□□□□□ -0.72
RPN8Q08723 SPC25YER018C 666 nt10.54□□□□□ -0.72
RPN8Q08723 BDH1YAL060W 1149 nt10.54□□□□□ -0.72
RPN8Q08723 YNL115CYNL115C 1935 nt10.53□□□□□ -0.72
RPN8Q08723 GPI16YHR188C 1833 nt10.53□□□□□ -0.72
RPN8Q08723 STB1YNL309W 1263 nt10.52□□□□□ -0.73
RPN8Q08723 YFL067WYFL067W 528 nt10.51□□□□□ -0.73
RPN8Q08723 CCT4YDL143W 1587 nt10.51□□□□□ -0.73
RPN8Q08723 VPS75YNL246W 795 nt10.5□□□□□ -0.73
RPN8Q08723 MSF1YPR047W 1410 nt10.5□□□□□ -0.73
RPN8Q08723 TRM5YHR070W 1500 nt10.49□□□□□ -0.73
RPN8Q08723 DDR2YOL052C-A 186 nt10.49□□□□□ -0.73
RPN8Q08723 ERF2YLR246W 1080 nt10.48□□□□□ -0.73
RPN8Q08723 SWC5YBR231C 912 nt10.47□□□□□ -0.73
RPN8Q08723 THI74YDR438W 1113 nt10.46□□□□□ -0.73
RPN8Q08723 YDR524C-BYDR524C-B 201 nt10.46□□□□□ -0.73
RPN8Q08723 PRP4YPR178W 1398 nt10.46□□□□□ -0.74
RPN8Q08723 AAC1YMR056C 930 nt10.45□□□□□ -0.74
RPN8Q08723 DPS1YLL018C 1674 nt10.42□□□□□ -0.74
RPN8Q08723 MIR1YJR077C 936 nt10.42□□□□□ -0.74
RPN8Q08723 BIO5YNR056C 1686 nt10.41□□□□□ -0.74
RPN8Q08723 PBP1YGR178C 2169 nt10.41□□□□□ -0.74
RPN8Q08723 YDL086C-AYDL086C-A 435 nt10.4□□□□□ -0.74
RPN8Q08723 VPS60YDR486C 690 nt10.39□□□□□ -0.75
RPN8Q08723 ATF2YGR177C 1608 nt10.37□□□□□ -0.75
RPN8Q08723 PAU7YAR020C 168 nt10.36□□□□□ -0.75
RPN8Q08723 CRR1YLR213C 1269 nt10.36□□□□□ -0.75
RPN8Q08723 CCA1YER168C 1641 nt10.36□□□□□ -0.75
RPN8Q08723 SNF1YDR477W 1902 nt10.35□□□□□ -0.75
RPN8Q08723 FEN2YCR028C 1539 nt10.35□□□□□ -0.75
RPN8Q08723 ANP1YEL036C 1503 nt10.34□□□□□ -0.75
RPN8Q08723 YHR056W-AYHR056W-A 435 nt10.33□□□□□ -0.76
RPN8Q08723 TIM17YJL143W 477 nt10.32□□□□□ -0.76
RPN8Q08723 CYT2YKL087C 675 nt10.31□□□□□ -0.76
RPN8Q08723 YMR244WYMR244W 1068 nt10.31□□□□□ -0.76
RPN8Q08723 HSL7YBR133C 2484 nt10.31□□□□□ -0.76
RPN8Q08723 GLR1YPL091W 1452 nt10.3□□□□□ -0.76
RPN8Q08723 ALG3YBL082C 1377 nt10.29□□□□□ -0.76
RPN8Q08723 DAT1YML113W 747 nt10.28□□□□□ -0.76
RPN8Q08723 HEM12YDR047W 1089 nt10.27□□□□□ -0.77
RPN8Q08723 YKR005CYKR005C 1578 nt10.25□□□□□ -0.77
RPN8Q08723 YGL034CYGL034C 366 nt10.24□□□□□ -0.77
RPN8Q08723 YIR016WYIR016W 798 nt10.24□□□□□ -0.77
RPN8Q08723 SNG1YGR197C 1644 nt10.24□□□□□ -0.77
RPN8Q08723 UBA4YHR111W 1323 nt10.22□□□□□ -0.77
RPN8Q08723 CMP2YML057W 1815 nt10.21□□□□□ -0.77
RPN8Q08723 YCR087WYCR087W 516 nt10.21□□□□□ -0.77
RPN8Q08723 BMT6YLR063W 1098 nt10.21□□□□□ -0.77
RPN8Q08723 MIC10YCL057C-A 294 nt10.21□□□□□ -0.77
RPN8Q08723 RAX1YOR301W 1308 nt10.19□□□□□ -0.78
RPN8Q08723 YSR3YKR053C 1215 nt10.19□□□□□ -0.78
RPN8Q08723 RBG2YGR173W 1107 nt10.15□□□□□ -0.78
RPN8Q08723 SHB17YKR043C 816 nt10.15□□□□□ -0.78
RPN8Q08723 NDI1YML120C 1542 nt10.15□□□□□ -0.78
RPN8Q08723 BNA2YJR078W 1362 nt10.14□□□□□ -0.79
RPN8Q08723 RPM1RPM1 483 nt10.14□□□□□ -0.79
RPN8Q08723 RDN25-1RDN25-1 3396 nt10.14□□□□□ -0.79
RPN8Q08723 RDN25-2RDN25-2 3396 nt10.14□□□□□ -0.79
RPN8Q08723 YMR226CYMR226C 804 nt10.13□□□□□ -0.79
RPN8Q08723 SHM2YLR058C 1410 nt10.12□□□□□ -0.79
RPN8Q08723 YAT1YAR035W 2064 nt10.1□□□□□ -0.79
RPN8Q08723 Q0182Q0182 405 nt10.1□□□□□ -0.79
RPN8Q08723 IRC24YIR036C 792 nt10.1□□□□□ -0.79
RPN8Q08723 XDJ1YLR090W 1380 nt10.1□□□□□ -0.79
RPN8Q08723 RET2YFR051C 1641 nt10.08□□□□□ -0.8
RPN8Q08723 YGR259CYGR259C 441 nt10.08□□□□□ -0.8
RPN8Q08723 YGR201CYGR201C 678 nt10.07□□□□□ -0.8
RPN8Q08723 RBG1YAL036C 1110 nt10.06□□□□□ -0.8
RPN8Q08723 XYL2YLR070C 1071 nt10.05□□□□□ -0.8
RPN8Q08723 AIM45YPR004C 1035 nt10.05□□□□□ -0.8
RPN8Q08723 MIC12YBR262C 321 nt10.05□□□□□ -0.8
RPN8Q08723 AGP1YCL025C 1902 nt10.05□□□□□ -0.8
RPN8Q08723 YDR010CYDR010C 333 nt10.04□□□□□ -0.8
RPN8Q08723 SGT2YOR007C 1041 nt10.04□□□□□ -0.8
RPN8Q08723 PHO89YBR296C 1725 nt10.02□□□□□ -0.81
RPN8Q08723 GDH3YAL062W 1374 nt10.01□□□□□ -0.81
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms