Protein–RNA interactions for Protein: Q08003

RFU1, Regulator of free ubiquitin chains 1, yeastyeast

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFU1Q08003 RTG1YOL067C 534 nt9.44□□□□□ -0.9
RFU1Q08003 RDN37-1RDN37-1 5354 nt9.43□□□□□ -0.9
RFU1Q08003 RDN37-2RDN37-2 5354 nt9.43□□□□□ -0.9
RFU1Q08003 SPT8YLR055C 1809 nt9.4□□□□□ -0.9
RFU1Q08003 YEL076C-AYEL076C-A 651 nt9.4□□□□□ -0.9
RFU1Q08003 YEL076CYEL076C 651 nt9.4□□□□□ -0.9
RFU1Q08003 MRPL8YJL063C 717 nt9.4□□□□□ -0.9
RFU1Q08003 YLR464WYLR464W 651 nt9.4□□□□□ -0.9
RFU1Q08003 ALG12YNR030W 1656 nt9.39□□□□□ -0.91
RFU1Q08003 SNG1YGR197C 1644 nt9.38□□□□□ -0.91
RFU1Q08003 YDL086C-AYDL086C-A 435 nt9.38□□□□□ -0.91
RFU1Q08003 YPR064WYPR064W 420 nt9.38□□□□□ -0.91
RFU1Q08003 YHR056W-AYHR056W-A 435 nt9.37□□□□□ -0.91
RFU1Q08003 STB1YNL309W 1263 nt9.37□□□□□ -0.91
RFU1Q08003 MIC10YCL057C-A 294 nt9.37□□□□□ -0.91
RFU1Q08003 YDR524C-BYDR524C-B 201 nt9.36□□□□□ -0.91
RFU1Q08003 ADO1YJR105W 1023 nt9.36□□□□□ -0.91
RFU1Q08003 SPC25YER018C 666 nt9.35□□□□□ -0.91
RFU1Q08003 HUA1YGR268C 597 nt9.35□□□□□ -0.91
RFU1Q08003 AHT1YHR093W 549 nt9.35□□□□□ -0.91
RFU1Q08003 GPI16YHR188C 1833 nt9.35□□□□□ -0.91
RFU1Q08003 ANP1YEL036C 1503 nt9.33□□□□□ -0.92
RFU1Q08003 WSC2YNL283C 1512 nt9.33□□□□□ -0.92
RFU1Q08003 RAX1YOR301W 1308 nt9.31□□□□□ -0.92
RFU1Q08003 TAD3YLR316C 969 nt9.3□□□□□ -0.92
RFU1Q08003 BNA2YJR078W 1362 nt9.29□□□□□ -0.92
RFU1Q08003 CCT4YDL143W 1587 nt9.29□□□□□ -0.92
RFU1Q08003 SWE1YJL187C 2460 nt9.28□□□□□ -0.92
RFU1Q08003 FEN2YCR028C 1539 nt9.28□□□□□ -0.92
RFU1Q08003 tL(GAG)GtL(GAG)G 82 nt9.27□□□□□ -0.93
RFU1Q08003 SWC5YBR231C 912 nt9.27□□□□□ -0.93
RFU1Q08003 VPS60YDR486C 690 nt9.26□□□□□ -0.93
RFU1Q08003 YIR016WYIR016W 798 nt9.2□□□□□ -0.94
RFU1Q08003 MIC12YBR262C 321 nt9.2□□□□□ -0.94
RFU1Q08003 ALG3YBL082C 1377 nt9.18□□□□□ -0.94
RFU1Q08003 YLR415CYLR415C 339 nt9.17□□□□□ -0.94
RFU1Q08003 CCA1YER168C 1641 nt9.16□□□□□ -0.94
RFU1Q08003 BDH1YAL060W 1149 nt9.14□□□□□ -0.95
RFU1Q08003 HHO1YPL127C 777 nt9.13□□□□□ -0.95
RFU1Q08003 HSL7YBR133C 2484 nt9.13□□□□□ -0.95
RFU1Q08003 YGR201CYGR201C 678 nt9.11□□□□□ -0.95
RFU1Q08003 SSN3YPL042C 1668 nt9.1□□□□□ -0.95
RFU1Q08003 HSP60YLR259C 1719 nt9.09□□□□□ -0.95
RFU1Q08003 NAR1YNL240C 1476 nt9.08□□□□□ -0.96
RFU1Q08003 YSP3YOR003W 1437 nt9.06□□□□□ -0.96
RFU1Q08003 XDJ1YLR090W 1380 nt9.06□□□□□ -0.96
RFU1Q08003 TIM17YJL143W 477 nt9.04□□□□□ -0.96
RFU1Q08003 DUS1YML080W 1272 nt9.03□□□□□ -0.96
RFU1Q08003 PEX25YPL112C 1185 nt9.03□□□□□ -0.96
RFU1Q08003 HEL2YDR266C 1920 nt9.02□□□□□ -0.97
RFU1Q08003 FUR4YBR021W 1902 nt9.01□□□□□ -0.97
RFU1Q08003 AGP1YCL025C 1902 nt9.01□□□□□ -0.97
RFU1Q08003 GDH3YAL062W 1374 nt9□□□□□ -0.97
RFU1Q08003 YNL115CYNL115C 1935 nt9□□□□□ -0.97
RFU1Q08003 YFR018CYFR018C 1092 nt8.99□□□□□ -0.97
RFU1Q08003 AVT6YER119C 1347 nt8.99□□□□□ -0.97
RFU1Q08003 SHM2YLR058C 1410 nt8.98□□□□□ -0.97
RFU1Q08003 CMP2YML057W 1815 nt8.98□□□□□ -0.97
RFU1Q08003 RDN25-1RDN25-1 3396 nt8.97□□□□□ -0.97
RFU1Q08003 RDN25-2RDN25-2 3396 nt8.97□□□□□ -0.97
RFU1Q08003 YDR094WYDR094W 336 nt8.97□□□□□ -0.97
RFU1Q08003 GOR1YNL274C 1053 nt8.97□□□□□ -0.97
RFU1Q08003 GLK1YCL040W 1503 nt8.96□□□□□ -0.97
RFU1Q08003 YCL074WYCL074W 927 nt8.96□□□□□ -0.98
RFU1Q08003 VPS75YNL246W 795 nt8.94□□□□□ -0.98
RFU1Q08003 FRE6YLL051C 2139 nt8.92□□□□□ -0.98
RFU1Q08003 YFL066CYFL066C 1179 nt8.92□□□□□ -0.98
RFU1Q08003 MET2YNL277W 1461 nt8.91□□□□□ -0.98
RFU1Q08003 RRT5YFR032C 870 nt8.91□□□□□ -0.98
RFU1Q08003 GID7YCL039W 2238 nt8.9□□□□□ -0.98
RFU1Q08003 YAT1YAR035W 2064 nt8.9□□□□□ -0.98
RFU1Q08003 SFP1YLR403W 2052 nt8.9□□□□□ -0.98
RFU1Q08003 DUT1YBR252W 444 nt8.88□□□□□ -0.99
RFU1Q08003 NPP1YCR026C 2229 nt8.87□□□□□ -0.99
RFU1Q08003 NIT1YIL164C 600 nt8.87□□□□□ -0.99
RFU1Q08003 DAT1YML113W 747 nt8.87□□□□□ -0.99
RFU1Q08003 PRE6YOL038W 765 nt8.87□□□□□ -0.99
RFU1Q08003 SGT2YOR007C 1041 nt8.87□□□□□ -0.99
RFU1Q08003 PRP4YPR178W 1398 nt8.86□□□□□ -0.99
RFU1Q08003 AQY2YLL052C 450 nt8.85□□□□□ -0.99
RFU1Q08003 BMT6YLR063W 1098 nt8.85□□□□□ -0.99
RFU1Q08003 PAU7YAR020C 168 nt8.85□□□□□ -0.99
RFU1Q08003 UBX6YJL048C 1191 nt8.84□□□□□ -0.99
RFU1Q08003 STR3YGL184C 1398 nt8.84□□□□□ -0.99
RFU1Q08003 YKR005CYKR005C 1578 nt8.82□□□□□ -1
RFU1Q08003 YCR102CYCR102C 1107 nt8.82□□□□□ -1
RFU1Q08003 PAU16YKL224C 372 nt8.81□□□□□ -1
RFU1Q08003 RDN18-1RDN18-1 1800 nt8.8□□□□□ -1
RFU1Q08003 RDN18-2RDN18-2 1800 nt8.8□□□□□ -1
RFU1Q08003 YGR259CYGR259C 441 nt8.8□□□□□ -1
RFU1Q08003 DPS1YLL018C 1674 nt8.78□□□□□ -1
RFU1Q08003 RTN2YDL204W 1182 nt8.76□□□□□ -1.01
RFU1Q08003 AAC1YMR056C 930 nt8.75□□□□□ -1.01
RFU1Q08003 MIR1YJR077C 936 nt8.73□□□□□ -1.01
RFU1Q08003 NBP35YGL091C 987 nt8.72□□□□□ -1.01
RFU1Q08003 PBP1YGR178C 2169 nt8.71□□□□□ -1.01
RFU1Q08003 CYT2YKL087C 675 nt8.71□□□□□ -1.02
RFU1Q08003 SHB17YKR043C 816 nt8.71□□□□□ -1.02
RFU1Q08003 ESBP6YNL125C 2022 nt8.7□□□□□ -1.02
RFU1Q08003 BSP1YPR171W 1731 nt8.69□□□□□ -1.02
Retrieved 100 of 7,029 protein–RNA pairs in 13.5 ms