Protein–RNA interactions for Protein: Q03776

PRP42, U1 small nuclear ribonucleoprotein component PRP42, yeastyeast

Known RBP Predictions only

Length 544 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PRP42Q03776 GLK1YCL040W 1503 nt12.89□□□□□ -0.35
PRP42Q03776 YHL050CYHL050C 2094 nt12.89□□□□□ -0.35
PRP42Q03776 YLR415CYLR415C 339 nt12.88□□□□□ -0.35
PRP42Q03776 TRM5YHR070W 1500 nt12.87□□□□□ -0.35
PRP42Q03776 STB1YNL309W 1263 nt12.83□□□□□ -0.36
PRP42Q03776 CCT4YDL143W 1587 nt12.81□□□□□ -0.36
PRP42Q03776 MSF1YPR047W 1410 nt12.81□□□□□ -0.36
PRP42Q03776 SPC25YER018C 666 nt12.81□□□□□ -0.36
PRP42Q03776 Q0182Q0182 405 nt12.78□□□□□ -0.36
PRP42Q03776 THI74YDR438W 1113 nt12.77□□□□□ -0.37
PRP42Q03776 YDR524C-BYDR524C-B 201 nt12.77□□□□□ -0.37
PRP42Q03776 PCH2YBR186W 1695 nt12.77□□□□□ -0.37
PRP42Q03776 MIR1YJR077C 936 nt12.76□□□□□ -0.37
PRP42Q03776 DDR2YOL052C-A 186 nt12.76□□□□□ -0.37
PRP42Q03776 GPI16YHR188C 1833 nt12.75□□□□□ -0.37
PRP42Q03776 SEC11YIR022W 504 nt12.75□□□□□ -0.37
PRP42Q03776 SWC5YBR231C 912 nt12.74□□□□□ -0.37
PRP42Q03776 ATF2YGR177C 1608 nt12.73□□□□□ -0.37
PRP42Q03776 VPS60YDR486C 690 nt12.72□□□□□ -0.37
PRP42Q03776 GUT2YIL155C 1950 nt12.72□□□□□ -0.37
PRP42Q03776 VPS75YNL246W 795 nt12.71□□□□□ -0.37
PRP42Q03776 YFL067WYFL067W 528 nt12.7□□□□□ -0.38
PRP42Q03776 ERF2YLR246W 1080 nt12.67□□□□□ -0.38
PRP42Q03776 YDL086C-AYDL086C-A 435 nt12.66□□□□□ -0.38
PRP42Q03776 YMR244WYMR244W 1068 nt12.66□□□□□ -0.38
PRP42Q03776 ALG3YBL082C 1377 nt12.65□□□□□ -0.38
PRP42Q03776 FEN2YCR028C 1539 nt12.63□□□□□ -0.39
PRP42Q03776 SPT8YLR055C 1809 nt12.62□□□□□ -0.39
PRP42Q03776 PIB2YGL023C 1908 nt12.62□□□□□ -0.39
PRP42Q03776 DAT1YML113W 747 nt12.61□□□□□ -0.39
PRP42Q03776 ANP1YEL036C 1503 nt12.59□□□□□ -0.39
PRP42Q03776 PAU7YAR020C 168 nt12.59□□□□□ -0.39
PRP42Q03776 CRR1YLR213C 1269 nt12.59□□□□□ -0.39
PRP42Q03776 GLR1YPL091W 1452 nt12.55□□□□□ -0.4
PRP42Q03776 NCP1YHR042W 2076 nt12.53□□□□□ -0.4
PRP42Q03776 YGL034CYGL034C 366 nt12.53□□□□□ -0.4
PRP42Q03776 SNG1YGR197C 1644 nt12.52□□□□□ -0.4
PRP42Q03776 YIR016WYIR016W 798 nt12.51□□□□□ -0.41
PRP42Q03776 HEM12YDR047W 1089 nt12.5□□□□□ -0.41
PRP42Q03776 UBA4YHR111W 1323 nt12.5□□□□□ -0.41
PRP42Q03776 RTF1YGL244W 1677 nt12.48□□□□□ -0.41
PRP42Q03776 TIM17YJL143W 477 nt12.48□□□□□ -0.41
PRP42Q03776 MIC10YCL057C-A 294 nt12.47□□□□□ -0.41
PRP42Q03776 SHB17YKR043C 816 nt12.45□□□□□ -0.42
PRP42Q03776 YSR3YKR053C 1215 nt12.43□□□□□ -0.42
PRP42Q03776 LYS4YDR234W 2082 nt12.42□□□□□ -0.42
PRP42Q03776 NDI1YML120C 1542 nt12.42□□□□□ -0.42
PRP42Q03776 RBG2YGR173W 1107 nt12.41□□□□□ -0.42
PRP42Q03776 BOP3YNL042W 1191 nt12.41□□□□□ -0.42
PRP42Q03776 SHM2YLR058C 1410 nt12.39□□□□□ -0.43
PRP42Q03776 RBG1YAL036C 1110 nt12.38□□□□□ -0.43
PRP42Q03776 XYL2YLR070C 1071 nt12.38□□□□□ -0.43
PRP42Q03776 PTK1YKL198C 1989 nt12.36□□□□□ -0.43
PRP42Q03776 YDR010CYDR010C 333 nt12.33□□□□□ -0.44
PRP42Q03776 XDJ1YLR090W 1380 nt12.32□□□□□ -0.44
PRP42Q03776 SGT2YOR007C 1041 nt12.3□□□□□ -0.44
PRP42Q03776 NIT1YIL164C 600 nt12.28□□□□□ -0.44
PRP42Q03776 PHO89YBR296C 1725 nt12.26□□□□□ -0.45
PRP42Q03776 BNA2YJR078W 1362 nt12.26□□□□□ -0.45
PRP42Q03776 YCR087WYCR087W 516 nt12.25□□□□□ -0.45
PRP42Q03776 GDH3YAL062W 1374 nt12.25□□□□□ -0.45
PRP42Q03776 RET2YFR051C 1641 nt12.25□□□□□ -0.45
PRP42Q03776 YMR226CYMR226C 804 nt12.21□□□□□ -0.45
PRP42Q03776 AIM45YPR004C 1035 nt12.21□□□□□ -0.45
PRP42Q03776 MIC12YBR262C 321 nt12.2□□□□□ -0.46
PRP42Q03776 YHR056W-AYHR056W-A 435 nt12.18□□□□□ -0.46
PRP42Q03776 MRP20YDR405W 792 nt12.13□□□□□ -0.47
PRP42Q03776 HHO1YPL127C 777 nt12.13□□□□□ -0.47
PRP42Q03776 RAX1YOR301W 1308 nt12.12□□□□□ -0.47
PRP42Q03776 YGR201CYGR201C 678 nt12.11□□□□□ -0.47
PRP42Q03776 SAM1YLR180W 1149 nt12.11□□□□□ -0.47
PRP42Q03776 COQ2YNR041C 1119 nt12.09□□□□□ -0.47
PRP42Q03776 YFL054CYFL054C 1941 nt12.08□□□□□ -0.48
PRP42Q03776 AVT6YER119C 1347 nt12.07□□□□□ -0.48
PRP42Q03776 YLR111WYLR111W 333 nt12.04□□□□□ -0.48
PRP42Q03776 SFA1YDL168W 1161 nt12.01□□□□□ -0.49
PRP42Q03776 GOR1YNL274C 1053 nt12□□□□□ -0.49
PRP42Q03776 YCR102CYCR102C 1107 nt11.97□□□□□ -0.49
PRP42Q03776 RPL4BYDR012W 1089 nt11.94□□□□□ -0.5
PRP42Q03776 YHL019W-AYHL019W-A 594 nt11.94□□□□□ -0.5
PRP42Q03776 RPL4AYBR031W 1089 nt11.94□□□□□ -0.5
PRP42Q03776 SDH5YOL071W 489 nt11.92□□□□□ -0.5
PRP42Q03776 RAD51YER095W 1203 nt11.9□□□□□ -0.5
PRP42Q03776 DUT1YBR252W 444 nt11.9□□□□□ -0.5
PRP42Q03776 CLB6YGR109C 1143 nt11.88□□□□□ -0.51
PRP42Q03776 PAC11YDR488C 1602 nt11.87□□□□□ -0.51
PRP42Q03776 SWE1YJL187C 2460 nt11.87□□□□□ -0.51
PRP42Q03776 RPS14BYJL191W 417 nt11.86□□□□□ -0.51
PRP42Q03776 RAD23YEL037C 1197 nt11.85□□□□□ -0.51
PRP42Q03776 AGP1YCL025C 1902 nt11.85□□□□□ -0.51
PRP42Q03776 SHH4YLR164W 507 nt11.81□□□□□ -0.52
PRP42Q03776 YLR437C-AYLR437C-A 228 nt11.81□□□□□ -0.52
PRP42Q03776 UTH1YKR042W 1098 nt11.79□□□□□ -0.52
PRP42Q03776 RPM1RPM1 483 nt11.79□□□□□ -0.52
PRP42Q03776 CCA1YER168C 1641 nt11.78□□□□□ -0.52
PRP42Q03776 TIR3YIL011W 810 nt11.78□□□□□ -0.52
PRP42Q03776 NBP35YGL091C 987 nt11.77□□□□□ -0.53
PRP42Q03776 TOM6YOR045W 186 nt11.77□□□□□ -0.53
PRP42Q03776 STE4YOR212W 1272 nt11.76□□□□□ -0.53
PRP42Q03776 CAB5YDR196C 726 nt11.75□□□□□ -0.53
Retrieved 100 of 7,029 protein–RNA pairs in 11.3 ms