Protein–RNA interactions for Protein: Q01080

RPA49, DNA-directed RNA polymerase I subunit RPA49, yeastyeast

Predicted RBP Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPA49Q01080 CRR1YLR213C 1269 nt11.74□□□□□ -0.53
RPA49Q01080 TAD3YLR316C 969 nt11.74□□□□□ -0.53
RPA49Q01080 LYS4YDR234W 2082 nt11.73□□□□□ -0.53
RPA49Q01080 STB1YNL309W 1263 nt11.7□□□□□ -0.54
RPA49Q01080 UBX6YJL048C 1191 nt11.68□□□□□ -0.54
RPA49Q01080 YDR524C-BYDR524C-B 201 nt11.67□□□□□ -0.54
RPA49Q01080 YDL086C-AYDL086C-A 435 nt11.66□□□□□ -0.54
RPA49Q01080 SPC25YER018C 666 nt11.66□□□□□ -0.54
RPA49Q01080 HEM12YDR047W 1089 nt11.65□□□□□ -0.54
RPA49Q01080 YDR094WYDR094W 336 nt11.64□□□□□ -0.55
RPA49Q01080 SNG1YGR197C 1644 nt11.64□□□□□ -0.55
RPA49Q01080 GPI16YHR188C 1833 nt11.63□□□□□ -0.55
RPA49Q01080 CCT4YDL143W 1587 nt11.62□□□□□ -0.55
RPA49Q01080 MIC10YCL057C-A 294 nt11.61□□□□□ -0.55
RPA49Q01080 SWC5YBR231C 912 nt11.58□□□□□ -0.56
RPA49Q01080 FEN2YCR028C 1539 nt11.58□□□□□ -0.56
RPA49Q01080 ANP1YEL036C 1503 nt11.58□□□□□ -0.56
RPA49Q01080 VPS60YDR486C 690 nt11.57□□□□□ -0.56
RPA49Q01080 YFL054CYFL054C 1941 nt11.56□□□□□ -0.56
RPA49Q01080 BDH1YAL060W 1149 nt11.53□□□□□ -0.56
RPA49Q01080 YLR415CYLR415C 339 nt11.53□□□□□ -0.56
RPA49Q01080 YFR018CYFR018C 1092 nt11.51□□□□□ -0.57
RPA49Q01080 ALG3YBL082C 1377 nt11.51□□□□□ -0.57
RPA49Q01080 YHR056W-AYHR056W-A 435 nt11.49□□□□□ -0.57
RPA49Q01080 YIR016WYIR016W 798 nt11.47□□□□□ -0.57
RPA49Q01080 SPT8YLR055C 1809 nt11.46□□□□□ -0.57
RPA49Q01080 YSP3YOR003W 1437 nt11.46□□□□□ -0.57
RPA49Q01080 BNA2YJR078W 1362 nt11.45□□□□□ -0.58
RPA49Q01080 YFL066CYFL066C 1179 nt11.44□□□□□ -0.58
RPA49Q01080 RRT5YFR032C 870 nt11.44□□□□□ -0.58
RPA49Q01080 PEX25YPL112C 1185 nt11.44□□□□□ -0.58
RPA49Q01080 RAX1YOR301W 1308 nt11.43□□□□□ -0.58
RPA49Q01080 PRE6YOL038W 765 nt11.43□□□□□ -0.58
RPA49Q01080 YNL115CYNL115C 1935 nt11.42□□□□□ -0.58
RPA49Q01080 PAU16YKL224C 372 nt11.37□□□□□ -0.59
RPA49Q01080 PAC11YDR488C 1602 nt11.35□□□□□ -0.59
RPA49Q01080 MIC12YBR262C 321 nt11.35□□□□□ -0.59
RPA49Q01080 SWE1YJL187C 2460 nt11.33□□□□□ -0.6
RPA49Q01080 TIM17YJL143W 477 nt11.3□□□□□ -0.6
RPA49Q01080 HHO1YPL127C 777 nt11.3□□□□□ -0.6
RPA49Q01080 XDJ1YLR090W 1380 nt11.28□□□□□ -0.6
RPA49Q01080 YFL015W-AYFL015W-A 318 nt11.28□□□□□ -0.6
RPA49Q01080 VPS75YNL246W 795 nt11.27□□□□□ -0.61
RPA49Q01080 YJL225CYJL225C 5277 nt11.26□□□□□ -0.61
RPA49Q01080 SHM2YLR058C 1410 nt11.26□□□□□ -0.61
RPA49Q01080 YGR201CYGR201C 678 nt11.24□□□□□ -0.61
RPA49Q01080 GDH3YAL062W 1374 nt11.23□□□□□ -0.61
RPA49Q01080 CCA1YER168C 1641 nt11.23□□□□□ -0.61
RPA49Q01080 PAU7YAR020C 168 nt11.18□□□□□ -0.62
RPA49Q01080 GLK1YCL040W 1503 nt11.18□□□□□ -0.62
RPA49Q01080 AVT6YER119C 1347 nt11.16□□□□□ -0.62
RPA49Q01080 NAT4YMR069W 858 nt11.16□□□□□ -0.62
RPA49Q01080 GOR1YNL274C 1053 nt11.13□□□□□ -0.63
RPA49Q01080 AGP1YCL025C 1902 nt11.13□□□□□ -0.63
RPA49Q01080 NIT1YIL164C 600 nt11.12□□□□□ -0.63
RPA49Q01080 MIR1YJR077C 936 nt11.12□□□□□ -0.63
RPA49Q01080 SGT2YOR007C 1041 nt11.12□□□□□ -0.63
RPA49Q01080 THI74YDR438W 1113 nt11.09□□□□□ -0.63
RPA49Q01080 DUS1YML080W 1272 nt11.07□□□□□ -0.64
RPA49Q01080 DUT1YBR252W 444 nt11.06□□□□□ -0.64
RPA49Q01080 MSF1YPR047W 1410 nt11.05□□□□□ -0.64
RPA49Q01080 SHB17YKR043C 816 nt11.02□□□□□ -0.65
RPA49Q01080 DAT1YML113W 747 nt11.01□□□□□ -0.65
RPA49Q01080 UBA4YHR111W 1323 nt10.99□□□□□ -0.65
RPA49Q01080 YCR102CYCR102C 1107 nt10.98□□□□□ -0.65
RPA49Q01080 FUR4YBR021W 1902 nt10.97□□□□□ -0.65
RPA49Q01080 YDR010CYDR010C 333 nt10.96□□□□□ -0.65
RPA49Q01080 NVJ2YPR091C 2313 nt10.96□□□□□ -0.66
RPA49Q01080 YCL074WYCL074W 927 nt10.94□□□□□ -0.66
RPA49Q01080 YSR3YKR053C 1215 nt10.94□□□□□ -0.66
RPA49Q01080 AQY2YLL052C 450 nt10.91□□□□□ -0.66
RPA49Q01080 STR3YGL184C 1398 nt10.9□□□□□ -0.66
RPA49Q01080 RET2YFR051C 1641 nt10.89□□□□□ -0.67
RPA49Q01080 YGL034CYGL034C 366 nt10.89□□□□□ -0.67
RPA49Q01080 PHO89YBR296C 1725 nt10.89□□□□□ -0.67
RPA49Q01080 RDN18-1RDN18-1 1800 nt10.87□□□□□ -0.67
RPA49Q01080 RDN18-2RDN18-2 1800 nt10.87□□□□□ -0.67
RPA49Q01080 SBA1YKL117W 651 nt10.87□□□□□ -0.67
RPA49Q01080 HSP60YLR259C 1719 nt10.87□□□□□ -0.67
RPA49Q01080 RDN37-1RDN37-1 5354 nt10.86□□□□□ -0.67
RPA49Q01080 RDN37-2RDN37-2 5354 nt10.86□□□□□ -0.67
RPA49Q01080 NBP35YGL091C 987 nt10.85□□□□□ -0.67
RPA49Q01080 XYL2YLR070C 1071 nt10.85□□□□□ -0.67
RPA49Q01080 YCR087WYCR087W 516 nt10.83□□□□□ -0.68
RPA49Q01080 BOR1YNL275W 1731 nt10.8□□□□□ -0.68
RPA49Q01080 MRP20YDR405W 792 nt10.78□□□□□ -0.68
RPA49Q01080 YHL019W-AYHL019W-A 594 nt10.78□□□□□ -0.68
RPA49Q01080 SFA1YDL168W 1161 nt10.77□□□□□ -0.69
RPA49Q01080 TIR3YIL011W 810 nt10.77□□□□□ -0.69
RPA49Q01080 RBG1YAL036C 1110 nt10.77□□□□□ -0.69
RPA49Q01080 SHH4YLR164W 507 nt10.74□□□□□ -0.69
RPA49Q01080 COQ2YNR041C 1119 nt10.74□□□□□ -0.69
RPA49Q01080 AIM45YPR004C 1035 nt10.74□□□□□ -0.69
RPA49Q01080 NDI1YML120C 1542 nt10.74□□□□□ -0.69
RPA49Q01080 PRP4YPR178W 1398 nt10.73□□□□□ -0.69
RPA49Q01080 YKR005CYKR005C 1578 nt10.73□□□□□ -0.69
RPA49Q01080 RTN2YDL204W 1182 nt10.69□□□□□ -0.7
RPA49Q01080 YGR259CYGR259C 441 nt10.69□□□□□ -0.7
RPA49Q01080 LSC2YGR244C 1284 nt10.68□□□□□ -0.7
RPA49Q01080 POM34YLR018C 900 nt10.67□□□□□ -0.7
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms