Protein–RNA interactions for Protein: P53972

RCM1, 25S rRNA (cytosine(2278)-C(5))-methyltransferase, yeastyeast

Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RCM1P53972 YLR415CYLR415C 339 nt14.6□□□□□ -0.07
RCM1P53972 STB1YNL309W 1263 nt14.59□□□□□ -0.07
RCM1P53972 CCT4YDL143W 1587 nt14.57□□□□□ -0.08
RCM1P53972 SPC25YER018C 666 nt14.57□□□□□ -0.08
RCM1P53972 ATF2YGR177C 1608 nt14.55□□□□□ -0.08
RCM1P53972 YDR524C-BYDR524C-B 201 nt14.53□□□□□ -0.08
RCM1P53972 GLK1YCL040W 1503 nt14.52□□□□□ -0.08
RCM1P53972 MIR1YJR077C 936 nt14.5□□□□□ -0.09
RCM1P53972 MSF1YPR047W 1410 nt14.49□□□□□ -0.09
RCM1P53972 VPS60YDR486C 690 nt14.49□□□□□ -0.09
RCM1P53972 DDR2YOL052C-A 186 nt14.47□□□□□ -0.09
RCM1P53972 GPI16YHR188C 1833 nt14.47□□□□□ -0.09
RCM1P53972 ALG3YBL082C 1377 nt14.46□□□□□ -0.1
RCM1P53972 THI74YDR438W 1113 nt14.45□□□□□ -0.1
RCM1P53972 SWC5YBR231C 912 nt14.45□□□□□ -0.1
RCM1P53972 YFL067WYFL067W 528 nt14.42□□□□□ -0.1
RCM1P53972 ERF2YLR246W 1080 nt14.42□□□□□ -0.1
RCM1P53972 CRR1YLR213C 1269 nt14.41□□□□□ -0.1
RCM1P53972 YDL086C-AYDL086C-A 435 nt14.4□□□□□ -0.1
RCM1P53972 VPS75YNL246W 795 nt14.4□□□□□ -0.1
RCM1P53972 FEN2YCR028C 1539 nt14.38□□□□□ -0.11
RCM1P53972 ANP1YEL036C 1503 nt14.36□□□□□ -0.11
RCM1P53972 BDF1YLR399C 2061 nt14.35□□□□□ -0.11
RCM1P53972 SPT8YLR055C 1809 nt14.35□□□□□ -0.11
RCM1P53972 YMR244WYMR244W 1068 nt14.32□□□□□ -0.12
RCM1P53972 SNG1YGR197C 1644 nt14.31□□□□□ -0.12
RCM1P53972 SEC11YIR022W 504 nt14.31□□□□□ -0.12
RCM1P53972 NCP1YHR042W 2076 nt14.3□□□□□ -0.12
RCM1P53972 DAT1YML113W 747 nt14.3□□□□□ -0.12
RCM1P53972 MIC10YCL057C-A 294 nt14.29□□□□□ -0.12
RCM1P53972 LYS4YDR234W 2082 nt14.27□□□□□ -0.13
RCM1P53972 YIR016WYIR016W 798 nt14.24□□□□□ -0.13
RCM1P53972 HEM12YDR047W 1089 nt14.23□□□□□ -0.13
RCM1P53972 PCH2YBR186W 1695 nt14.2□□□□□ -0.14
RCM1P53972 YGL034CYGL034C 366 nt14.19□□□□□ -0.14
RCM1P53972 PAU7YAR020C 168 nt14.19□□□□□ -0.14
RCM1P53972 UBA4YHR111W 1323 nt14.17□□□□□ -0.14
RCM1P53972 TAT1YBR069C 1860 nt14.17□□□□□ -0.14
RCM1P53972 GLR1YPL091W 1452 nt14.16□□□□□ -0.14
RCM1P53972 SHB17YKR043C 816 nt14.15□□□□□ -0.14
RCM1P53972 TIM17YJL143W 477 nt14.14□□□□□ -0.15
RCM1P53972 GUT2YIL155C 1950 nt14.11□□□□□ -0.15
RCM1P53972 SHM2YLR058C 1410 nt14.11□□□□□ -0.15
RCM1P53972 YSR3YKR053C 1215 nt14.07□□□□□ -0.16
RCM1P53972 YDR010CYDR010C 333 nt14.06□□□□□ -0.16
RCM1P53972 XYL2YLR070C 1071 nt14.05□□□□□ -0.16
RCM1P53972 XDJ1YLR090W 1380 nt14.04□□□□□ -0.16
RCM1P53972 NDI1YML120C 1542 nt14.03□□□□□ -0.16
RCM1P53972 NIT1YIL164C 600 nt14.02□□□□□ -0.17
RCM1P53972 RBG2YGR173W 1107 nt14.01□□□□□ -0.17
RCM1P53972 RBG1YAL036C 1110 nt14.01□□□□□ -0.17
RCM1P53972 SGT2YOR007C 1041 nt14.01□□□□□ -0.17
RCM1P53972 PIB2YGL023C 1908 nt14□□□□□ -0.17
RCM1P53972 BOP3YNL042W 1191 nt14□□□□□ -0.17
RCM1P53972 RTF1YGL244W 1677 nt13.98□□□□□ -0.17
RCM1P53972 YHR056W-AYHR056W-A 435 nt13.95□□□□□ -0.18
RCM1P53972 MIC12YBR262C 321 nt13.94□□□□□ -0.18
RCM1P53972 PHO89YBR296C 1725 nt13.91□□□□□ -0.18
RCM1P53972 BNA2YJR078W 1362 nt13.91□□□□□ -0.18
RCM1P53972 GDH3YAL062W 1374 nt13.91□□□□□ -0.18
RCM1P53972 RET2YFR051C 1641 nt13.9□□□□□ -0.18
RCM1P53972 AIM45YPR004C 1035 nt13.84□□□□□ -0.19
RCM1P53972 YCR087WYCR087W 516 nt13.82□□□□□ -0.2
RCM1P53972 PTK1YKL198C 1989 nt13.82□□□□□ -0.2
RCM1P53972 RAX1YOR301W 1308 nt13.81□□□□□ -0.2
RCM1P53972 HHO1YPL127C 777 nt13.78□□□□□ -0.2
RCM1P53972 YGR201CYGR201C 678 nt13.77□□□□□ -0.21
RCM1P53972 COQ2YNR041C 1119 nt13.76□□□□□ -0.21
RCM1P53972 AVT6YER119C 1347 nt13.72□□□□□ -0.21
RCM1P53972 YMR226CYMR226C 804 nt13.71□□□□□ -0.21
RCM1P53972 SFA1YDL168W 1161 nt13.7□□□□□ -0.22
RCM1P53972 MRP20YDR405W 792 nt13.69□□□□□ -0.22
RCM1P53972 DUT1YBR252W 444 nt13.67□□□□□ -0.22
RCM1P53972 SAM1YLR180W 1149 nt13.65□□□□□ -0.22
RCM1P53972 AGP1YCL025C 1902 nt13.62□□□□□ -0.23
RCM1P53972 GOR1YNL274C 1053 nt13.6□□□□□ -0.23
RCM1P53972 YFL054CYFL054C 1941 nt13.58□□□□□ -0.23
RCM1P53972 YCR102CYCR102C 1107 nt13.58□□□□□ -0.24
RCM1P53972 YHL019W-AYHL019W-A 594 nt13.58□□□□□ -0.24
RCM1P53972 RAD51YER095W 1203 nt13.55□□□□□ -0.24
RCM1P53972 YLR111WYLR111W 333 nt13.55□□□□□ -0.24
RCM1P53972 SHH4YLR164W 507 nt13.53□□□□□ -0.24
RCM1P53972 CCA1YER168C 1641 nt13.53□□□□□ -0.24
RCM1P53972 RPL4BYDR012W 1089 nt13.51□□□□□ -0.25
RCM1P53972 RPL4AYBR031W 1089 nt13.51□□□□□ -0.25
RCM1P53972 CAB5YDR196C 726 nt13.48□□□□□ -0.25
RCM1P53972 RPS14BYJL191W 417 nt13.48□□□□□ -0.25
RCM1P53972 SDH5YOL071W 489 nt13.45□□□□□ -0.26
RCM1P53972 NBP35YGL091C 987 nt13.43□□□□□ -0.26
RCM1P53972 YLR437C-AYLR437C-A 228 nt13.42□□□□□ -0.26
RCM1P53972 TOM6YOR045W 186 nt13.41□□□□□ -0.26
RCM1P53972 TIR3YIL011W 810 nt13.39□□□□□ -0.27
RCM1P53972 RAD23YEL037C 1197 nt13.38□□□□□ -0.27
RCM1P53972 CLB6YGR109C 1143 nt13.38□□□□□ -0.27
RCM1P53972 PEX2YJL210W 816 nt13.35□□□□□ -0.27
RCM1P53972 HIP1YGR191W 1812 nt13.34□□□□□ -0.27
RCM1P53972 SWE1YJL187C 2460 nt13.34□□□□□ -0.27
RCM1P53972 UTH1YKR042W 1098 nt13.34□□□□□ -0.27
RCM1P53972 YGR012WYGR012W 1182 nt13.32□□□□□ -0.28
RCM1P53972 POM34YLR018C 900 nt13.32□□□□□ -0.28
Retrieved 100 of 7,029 protein–RNA pairs in 59.1 ms