Protein–RNA interactions for Protein: P49957

TRM9, tRNA (carboxymethyluridine(34)-5-O)-methyltransferase, yeastyeast

Predictions only

Length 279 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRM9P49957 Q0182Q0182 405 nt10.24□□□□□ -0.77
TRM9P49957 PEX25YPL112C 1185 nt10.21□□□□□ -0.77
TRM9P49957 SPC25YER018C 666 nt10.2□□□□□ -0.78
TRM9P49957 BDH1YAL060W 1149 nt10.2□□□□□ -0.78
TRM9P49957 YSP3YOR003W 1437 nt10.19□□□□□ -0.78
TRM9P49957 TRM5YHR070W 1500 nt10.18□□□□□ -0.78
TRM9P49957 ERF2YLR246W 1080 nt10.16□□□□□ -0.78
TRM9P49957 STB1YNL309W 1263 nt10.16□□□□□ -0.78
TRM9P49957 YFL066CYFL066C 1179 nt10.15□□□□□ -0.78
TRM9P49957 CCT4YDL143W 1587 nt10.14□□□□□ -0.79
TRM9P49957 YFL067WYFL067W 528 nt10.14□□□□□ -0.79
TRM9P49957 YLR415CYLR415C 339 nt10.14□□□□□ -0.79
TRM9P49957 ATF2YGR177C 1608 nt10.14□□□□□ -0.79
TRM9P49957 SBA1YKL117W 651 nt10.13□□□□□ -0.79
TRM9P49957 GPI16YHR188C 1833 nt10.12□□□□□ -0.79
TRM9P49957 DDR2YOL052C-A 186 nt10.11□□□□□ -0.79
TRM9P49957 PCH2YBR186W 1695 nt10.11□□□□□ -0.79
TRM9P49957 NCP1YHR042W 2076 nt10.11□□□□□ -0.79
TRM9P49957 YNL115CYNL115C 1935 nt10.1□□□□□ -0.79
TRM9P49957 YDR524C-BYDR524C-B 201 nt10.1□□□□□ -0.79
TRM9P49957 CRR1YLR213C 1269 nt10.1□□□□□ -0.79
TRM9P49957 YDL086C-AYDL086C-A 435 nt10.08□□□□□ -0.8
TRM9P49957 ANP1YEL036C 1503 nt10.07□□□□□ -0.8
TRM9P49957 VPS60YDR486C 690 nt10.06□□□□□ -0.8
TRM9P49957 NAT4YMR069W 858 nt10.04□□□□□ -0.8
TRM9P49957 GUT2YIL155C 1950 nt10.04□□□□□ -0.8
TRM9P49957 VPS75YNL246W 795 nt10.03□□□□□ -0.8
TRM9P49957 SWC5YBR231C 912 nt10.03□□□□□ -0.8
TRM9P49957 FEN2YCR028C 1539 nt10.02□□□□□ -0.8
TRM9P49957 LYS4YDR234W 2082 nt10.02□□□□□ -0.81
TRM9P49957 ALG3YBL082C 1377 nt10.01□□□□□ -0.81
TRM9P49957 UME6YDR207C 2511 nt10□□□□□ -0.81
TRM9P49957 SNG1YGR197C 1644 nt10□□□□□ -0.81
TRM9P49957 SPT8YLR055C 1809 nt9.98□□□□□ -0.81
TRM9P49957 GLK1YCL040W 1503 nt9.98□□□□□ -0.81
TRM9P49957 MIR1YJR077C 936 nt9.98□□□□□ -0.81
TRM9P49957 HEM12YDR047W 1089 nt9.97□□□□□ -0.81
TRM9P49957 BOP3YNL042W 1191 nt9.97□□□□□ -0.81
TRM9P49957 MSF1YPR047W 1410 nt9.96□□□□□ -0.82
TRM9P49957 THI74YDR438W 1113 nt9.94□□□□□ -0.82
TRM9P49957 PIB2YGL023C 1908 nt9.94□□□□□ -0.82
TRM9P49957 RTF1YGL244W 1677 nt9.93□□□□□ -0.82
TRM9P49957 YIR016WYIR016W 798 nt9.93□□□□□ -0.82
TRM9P49957 MIC10YCL057C-A 294 nt9.92□□□□□ -0.82
TRM9P49957 TIM17YJL143W 477 nt9.86□□□□□ -0.83
TRM9P49957 DAT1YML113W 747 nt9.82□□□□□ -0.84
TRM9P49957 MIC12YBR262C 321 nt9.82□□□□□ -0.84
TRM9P49957 YHR056W-AYHR056W-A 435 nt9.81□□□□□ -0.84
TRM9P49957 PAU7YAR020C 168 nt9.8□□□□□ -0.84
TRM9P49957 SHM2YLR058C 1410 nt9.79□□□□□ -0.84
TRM9P49957 PTK1YKL198C 1989 nt9.79□□□□□ -0.84
TRM9P49957 UBA4YHR111W 1323 nt9.77□□□□□ -0.85
TRM9P49957 XDJ1YLR090W 1380 nt9.76□□□□□ -0.85
TRM9P49957 BNA2YJR078W 1362 nt9.75□□□□□ -0.85
TRM9P49957 YGL034CYGL034C 366 nt9.75□□□□□ -0.85
TRM9P49957 SHB17YKR043C 816 nt9.74□□□□□ -0.85
TRM9P49957 YMR244WYMR244W 1068 nt9.74□□□□□ -0.85
TRM9P49957 YGR201CYGR201C 678 nt9.73□□□□□ -0.85
TRM9P49957 NIT1YIL164C 600 nt9.73□□□□□ -0.85
TRM9P49957 RAX1YOR301W 1308 nt9.72□□□□□ -0.85
TRM9P49957 YDR010CYDR010C 333 nt9.71□□□□□ -0.86
TRM9P49957 SGT2YOR007C 1041 nt9.7□□□□□ -0.86
TRM9P49957 GLR1YPL091W 1452 nt9.68□□□□□ -0.86
TRM9P49957 GDH3YAL062W 1374 nt9.68□□□□□ -0.86
TRM9P49957 YSR3YKR053C 1215 nt9.68□□□□□ -0.86
TRM9P49957 RET2YFR051C 1641 nt9.67□□□□□ -0.86
TRM9P49957 BOR1YNL275W 1731 nt9.66□□□□□ -0.86
TRM9P49957 HHO1YPL127C 777 nt9.65□□□□□ -0.86
TRM9P49957 YCR087WYCR087W 516 nt9.64□□□□□ -0.87
TRM9P49957 XYL2YLR070C 1071 nt9.61□□□□□ -0.87
TRM9P49957 NDI1YML120C 1542 nt9.6□□□□□ -0.87
TRM9P49957 YFL054CYFL054C 1941 nt9.6□□□□□ -0.87
TRM9P49957 AIM45YPR004C 1035 nt9.58□□□□□ -0.88
TRM9P49957 PHO89YBR296C 1725 nt9.58□□□□□ -0.88
TRM9P49957 RBG2YGR173W 1107 nt9.57□□□□□ -0.88
TRM9P49957 RBG1YAL036C 1110 nt9.56□□□□□ -0.88
TRM9P49957 AVT6YER119C 1347 nt9.56□□□□□ -0.88
TRM9P49957 MCH5YOR306C 1566 nt9.54□□□□□ -0.88
TRM9P49957 YCR102CYCR102C 1107 nt9.52□□□□□ -0.89
TRM9P49957 GOR1YNL274C 1053 nt9.52□□□□□ -0.89
TRM9P49957 YMR226CYMR226C 804 nt9.51□□□□□ -0.89
TRM9P49957 AGP1YCL025C 1902 nt9.5□□□□□ -0.89
TRM9P49957 MRP20YDR405W 792 nt9.48□□□□□ -0.89
TRM9P49957 COQ2YNR041C 1119 nt9.48□□□□□ -0.89
TRM9P49957 CCA1YER168C 1641 nt9.48□□□□□ -0.89
TRM9P49957 SFA1YDL168W 1161 nt9.47□□□□□ -0.89
TRM9P49957 SWE1YJL187C 2460 nt9.44□□□□□ -0.9
TRM9P49957 DUT1YBR252W 444 nt9.43□□□□□ -0.9
TRM9P49957 RPL4BYDR012W 1089 nt9.4□□□□□ -0.9
TRM9P49957 NBP35YGL091C 987 nt9.4□□□□□ -0.9
TRM9P49957 RPL4AYBR031W 1089 nt9.4□□□□□ -0.9
TRM9P49957 YHL019W-AYHL019W-A 594 nt9.39□□□□□ -0.91
TRM9P49957 TIR3YIL011W 810 nt9.39□□□□□ -0.91
TRM9P49957 CLB6YGR109C 1143 nt9.36□□□□□ -0.91
TRM9P49957 RPS14BYJL191W 417 nt9.35□□□□□ -0.91
TRM9P49957 YLR111WYLR111W 333 nt9.33□□□□□ -0.92
TRM9P49957 SHH4YLR164W 507 nt9.33□□□□□ -0.92
TRM9P49957 SAM1YLR180W 1149 nt9.33□□□□□ -0.92
TRM9P49957 LSC2YGR244C 1284 nt9.31□□□□□ -0.92
TRM9P49957 UTH1YKR042W 1098 nt9.31□□□□□ -0.92
Retrieved 100 of 7,029 protein–RNA pairs in 63 ms