Protein–RNA interactions for Protein: P46678

BDP1, Transcription factor TFIIIB component B'', yeastyeast

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BDP1P46678 AHT1YHR093W 549 nt13.22□□□□□ -0.29
BDP1P46678 NME1NME1 340 nt13.2□□□□□ -0.3
BDP1P46678 YFL067WYFL067W 528 nt13.17□□□□□ -0.3
BDP1P46678 YPR064WYPR064W 420 nt13.17□□□□□ -0.3
BDP1P46678 UBX6YJL048C 1191 nt13.16□□□□□ -0.3
BDP1P46678 SPC25YER018C 666 nt13.12□□□□□ -0.31
BDP1P46678 TAD3YLR316C 969 nt13.12□□□□□ -0.31
BDP1P46678 STB1YNL309W 1263 nt13.12□□□□□ -0.31
BDP1P46678 tL(GAG)GtL(GAG)G 82 nt13.11□□□□□ -0.31
BDP1P46678 DDR2YOL052C-A 186 nt13.11□□□□□ -0.31
BDP1P46678 SNG1YGR197C 1644 nt13.09□□□□□ -0.31
BDP1P46678 YDL086C-AYDL086C-A 435 nt13.08□□□□□ -0.32
BDP1P46678 MIC10YCL057C-A 294 nt13.08□□□□□ -0.32
BDP1P46678 HEM12YDR047W 1089 nt13.07□□□□□ -0.32
BDP1P46678 YDR524C-BYDR524C-B 201 nt13.06□□□□□ -0.32
BDP1P46678 ANP1YEL036C 1503 nt13.06□□□□□ -0.32
BDP1P46678 CCT4YDL143W 1587 nt13.03□□□□□ -0.32
BDP1P46678 GPI16YHR188C 1833 nt13.02□□□□□ -0.32
BDP1P46678 YFL054CYFL054C 1941 nt13.01□□□□□ -0.33
BDP1P46678 YJL225CYJL225C 5277 nt13□□□□□ -0.33
BDP1P46678 YDR094WYDR094W 336 nt12.99□□□□□ -0.33
BDP1P46678 VPS60YDR486C 690 nt12.99□□□□□ -0.33
BDP1P46678 YHR056W-AYHR056W-A 435 nt12.98□□□□□ -0.33
BDP1P46678 FEN2YCR028C 1539 nt12.98□□□□□ -0.33
BDP1P46678 BDH1YAL060W 1149 nt12.97□□□□□ -0.33
BDP1P46678 ALG3YBL082C 1377 nt12.94□□□□□ -0.34
BDP1P46678 SPT8YLR055C 1809 nt12.92□□□□□ -0.34
BDP1P46678 YFR018CYFR018C 1092 nt12.9□□□□□ -0.34
BDP1P46678 SWC5YBR231C 912 nt12.9□□□□□ -0.34
BDP1P46678 YSP3YOR003W 1437 nt12.89□□□□□ -0.35
BDP1P46678 PRE6YOL038W 765 nt12.89□□□□□ -0.35
BDP1P46678 YIR016WYIR016W 798 nt12.87□□□□□ -0.35
BDP1P46678 YLR415CYLR415C 339 nt12.87□□□□□ -0.35
BDP1P46678 RAX1YOR301W 1308 nt12.85□□□□□ -0.35
BDP1P46678 MIC12YBR262C 321 nt12.83□□□□□ -0.36
BDP1P46678 PEX25YPL112C 1185 nt12.82□□□□□ -0.36
BDP1P46678 SWE1YJL187C 2460 nt12.78□□□□□ -0.36
BDP1P46678 YFL066CYFL066C 1179 nt12.78□□□□□ -0.36
BDP1P46678 CSM2YIL132C 642 nt12.78□□□□□ -0.36
BDP1P46678 BNA2YJR078W 1362 nt12.77□□□□□ -0.37
BDP1P46678 YNL115CYNL115C 1935 nt12.76□□□□□ -0.37
BDP1P46678 YFL015W-AYFL015W-A 318 nt12.75□□□□□ -0.37
BDP1P46678 PAU16YKL224C 372 nt12.75□□□□□ -0.37
BDP1P46678 CCA1YER168C 1641 nt12.67□□□□□ -0.38
BDP1P46678 RRT5YFR032C 870 nt12.67□□□□□ -0.38
BDP1P46678 RDN37-1RDN37-1 5354 nt12.66□□□□□ -0.38
BDP1P46678 RDN37-2RDN37-2 5354 nt12.66□□□□□ -0.38
BDP1P46678 XDJ1YLR090W 1380 nt12.65□□□□□ -0.38
BDP1P46678 YGR201CYGR201C 678 nt12.63□□□□□ -0.39
BDP1P46678 VPS75YNL246W 795 nt12.63□□□□□ -0.39
BDP1P46678 HHO1YPL127C 777 nt12.63□□□□□ -0.39
BDP1P46678 SHM2YLR058C 1410 nt12.61□□□□□ -0.39
BDP1P46678 TIM17YJL143W 477 nt12.6□□□□□ -0.39
BDP1P46678 PAU21YOR394W 495 nt12.6□□□□□ -0.39
BDP1P46678 PAU22YPL282C 495 nt12.6□□□□□ -0.39
BDP1P46678 AGP1YCL025C 1902 nt12.6□□□□□ -0.39
BDP1P46678 UME6YDR207C 2511 nt12.58□□□□□ -0.4
BDP1P46678 GDH3YAL062W 1374 nt12.55□□□□□ -0.4
BDP1P46678 NIT1YIL164C 600 nt12.53□□□□□ -0.4
BDP1P46678 MIR1YJR077C 936 nt12.47□□□□□ -0.41
BDP1P46678 ARO7YPR060C 771 nt12.47□□□□□ -0.41
BDP1P46678 SGT2YOR007C 1041 nt12.46□□□□□ -0.41
BDP1P46678 DUT1YBR252W 444 nt12.46□□□□□ -0.41
BDP1P46678 AVT6YER119C 1347 nt12.45□□□□□ -0.42
BDP1P46678 DAT1YML113W 747 nt12.42□□□□□ -0.42
BDP1P46678 GOR1YNL274C 1053 nt12.4□□□□□ -0.42
BDP1P46678 NAT4YMR069W 858 nt12.36□□□□□ -0.43
BDP1P46678 GLK1YCL040W 1503 nt12.36□□□□□ -0.43
BDP1P46678 FUR4YBR021W 1902 nt12.35□□□□□ -0.43
BDP1P46678 THI74YDR438W 1113 nt12.35□□□□□ -0.43
BDP1P46678 PAU7YAR020C 168 nt12.35□□□□□ -0.43
BDP1P46678 PAM17YKR065C 594 nt12.33□□□□□ -0.44
BDP1P46678 YDR010CYDR010C 333 nt12.32□□□□□ -0.44
BDP1P46678 SHB17YKR043C 816 nt12.32□□□□□ -0.44
BDP1P46678 DUS1YML080W 1272 nt12.32□□□□□ -0.44
BDP1P46678 MSF1YPR047W 1410 nt12.31□□□□□ -0.44
BDP1P46678 YCL074WYCL074W 927 nt12.31□□□□□ -0.44
BDP1P46678 SBA1YKL117W 651 nt12.31□□□□□ -0.44
BDP1P46678 STR3YGL184C 1398 nt12.29□□□□□ -0.44
BDP1P46678 RDN18-1RDN18-1 1800 nt12.28□□□□□ -0.44
BDP1P46678 RDN18-2RDN18-2 1800 nt12.28□□□□□ -0.44
BDP1P46678 YCR102CYCR102C 1107 nt12.28□□□□□ -0.44
BDP1P46678 VAR1Q0140 1197 nt12.27□□□□□ -0.45
BDP1P46678 UBA4YHR111W 1323 nt12.27□□□□□ -0.45
BDP1P46678 NBP35YGL091C 987 nt12.22□□□□□ -0.45
BDP1P46678 HSP60YLR259C 1719 nt12.21□□□□□ -0.45
BDP1P46678 RET2YFR051C 1641 nt12.21□□□□□ -0.46
BDP1P46678 AQY2YLL052C 450 nt12.18□□□□□ -0.46
BDP1P46678 REG2YBR050C 1017 nt12.18□□□□□ -0.46
BDP1P46678 YSR3YKR053C 1215 nt12.16□□□□□ -0.46
BDP1P46678 YDR509WYDR509W 348 nt12.15□□□□□ -0.46
BDP1P46678 YGL034CYGL034C 366 nt12.14□□□□□ -0.47
BDP1P46678 PHO89YBR296C 1725 nt12.12□□□□□ -0.47
BDP1P46678 SFA1YDL168W 1161 nt12.12□□□□□ -0.47
BDP1P46678 TIR3YIL011W 810 nt12.1□□□□□ -0.47
BDP1P46678 SHH4YLR164W 507 nt12.1□□□□□ -0.47
BDP1P46678 YKR005CYKR005C 1578 nt12.09□□□□□ -0.47
BDP1P46678 BOR1YNL275W 1731 nt12.09□□□□□ -0.47
BDP1P46678 XYL2YLR070C 1071 nt12.08□□□□□ -0.48
BDP1P46678 PRP4YPR178W 1398 nt12.06□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms