Protein–RNA interactions for Protein: P40343

VPS27, Vacuolar protein sorting-associated protein 27, yeastyeast

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS27P40343 YDR524C-BYDR524C-B 201 nt13.84□□□□□ -0.19
VPS27P40343 YHR056W-AYHR056W-A 435 nt13.84□□□□□ -0.19
VPS27P40343 WSC2YNL283C 1512 nt13.84□□□□□ -0.19
VPS27P40343 YEL076C-AYEL076C-A 651 nt13.81□□□□□ -0.2
VPS27P40343 YEL076CYEL076C 651 nt13.81□□□□□ -0.2
VPS27P40343 YLR464WYLR464W 651 nt13.81□□□□□ -0.2
VPS27P40343 SWE1YJL187C 2460 nt13.8□□□□□ -0.2
VPS27P40343 AHT1YHR093W 549 nt13.8□□□□□ -0.2
VPS27P40343 YPR064WYPR064W 420 nt13.8□□□□□ -0.2
VPS27P40343 SPC25YER018C 666 nt13.79□□□□□ -0.2
VPS27P40343 ANP1YEL036C 1503 nt13.79□□□□□ -0.2
VPS27P40343 RAX1YOR301W 1308 nt13.75□□□□□ -0.21
VPS27P40343 FEN2YCR028C 1539 nt13.74□□□□□ -0.21
VPS27P40343 GPI16YHR188C 1833 nt13.74□□□□□ -0.21
VPS27P40343 CCT4YDL143W 1587 nt13.72□□□□□ -0.21
VPS27P40343 HUA1YGR268C 597 nt13.72□□□□□ -0.21
VPS27P40343 VPS60YDR486C 690 nt13.71□□□□□ -0.21
VPS27P40343 MRPL8YJL063C 717 nt13.71□□□□□ -0.21
VPS27P40343 TAD3YLR316C 969 nt13.71□□□□□ -0.21
VPS27P40343 BNA2YJR078W 1362 nt13.68□□□□□ -0.22
VPS27P40343 ADO1YJR105W 1023 nt13.66□□□□□ -0.22
VPS27P40343 SWC5YBR231C 912 nt13.66□□□□□ -0.22
VPS27P40343 ALG3YBL082C 1377 nt13.65□□□□□ -0.22
VPS27P40343 YIR016WYIR016W 798 nt13.63□□□□□ -0.23
VPS27P40343 CCA1YER168C 1641 nt13.63□□□□□ -0.23
VPS27P40343 tL(GAG)GtL(GAG)G 82 nt13.59□□□□□ -0.23
VPS27P40343 MIC12YBR262C 321 nt13.57□□□□□ -0.24
VPS27P40343 BDH1YAL060W 1149 nt13.53□□□□□ -0.24
VPS27P40343 HHO1YPL127C 777 nt13.52□□□□□ -0.25
VPS27P40343 YLR415CYLR415C 339 nt13.49□□□□□ -0.25
VPS27P40343 NVJ2YPR091C 2313 nt13.46□□□□□ -0.26
VPS27P40343 AGP1YCL025C 1902 nt13.45□□□□□ -0.26
VPS27P40343 YSP3YOR003W 1437 nt13.4□□□□□ -0.26
VPS27P40343 FUR4YBR021W 1902 nt13.39□□□□□ -0.27
VPS27P40343 XDJ1YLR090W 1380 nt13.39□□□□□ -0.27
VPS27P40343 BOR1YNL275W 1731 nt13.37□□□□□ -0.27
VPS27P40343 YGR201CYGR201C 678 nt13.37□□□□□ -0.27
VPS27P40343 DUS1YML080W 1272 nt13.37□□□□□ -0.27
VPS27P40343 GDH3YAL062W 1374 nt13.34□□□□□ -0.27
VPS27P40343 HSP60YLR259C 1719 nt13.34□□□□□ -0.27
VPS27P40343 YNL115CYNL115C 1935 nt13.33□□□□□ -0.28
VPS27P40343 DUT1YBR252W 444 nt13.32□□□□□ -0.28
VPS27P40343 SHM2YLR058C 1410 nt13.31□□□□□ -0.28
VPS27P40343 GLK1YCL040W 1503 nt13.31□□□□□ -0.28
VPS27P40343 YFL066CYFL066C 1179 nt13.31□□□□□ -0.28
VPS27P40343 AVT6YER119C 1347 nt13.31□□□□□ -0.28
VPS27P40343 TIM17YJL143W 477 nt13.29□□□□□ -0.28
VPS27P40343 PEX25YPL112C 1185 nt13.28□□□□□ -0.28
VPS27P40343 GOR1YNL274C 1053 nt13.25□□□□□ -0.29
VPS27P40343 YCL074WYCL074W 927 nt13.23□□□□□ -0.29
VPS27P40343 YFR018CYFR018C 1092 nt13.22□□□□□ -0.29
VPS27P40343 PRE6YOL038W 765 nt13.21□□□□□ -0.29
VPS27P40343 YDR094WYDR094W 336 nt13.18□□□□□ -0.3
VPS27P40343 RDN18-1RDN18-1 1800 nt13.16□□□□□ -0.3
VPS27P40343 RDN18-2RDN18-2 1800 nt13.16□□□□□ -0.3
VPS27P40343 NIT1YIL164C 600 nt13.15□□□□□ -0.3
VPS27P40343 STR3YGL184C 1398 nt13.15□□□□□ -0.3
VPS27P40343 SGT2YOR007C 1041 nt13.14□□□□□ -0.31
VPS27P40343 PRP4YPR178W 1398 nt13.14□□□□□ -0.31
VPS27P40343 UBX6YJL048C 1191 nt13.13□□□□□ -0.31
VPS27P40343 AQY2YLL052C 450 nt13.13□□□□□ -0.31
VPS27P40343 VPS75YNL246W 795 nt13.12□□□□□ -0.31
VPS27P40343 YKR005CYKR005C 1578 nt13.09□□□□□ -0.31
VPS27P40343 DPS1YLL018C 1674 nt13.05□□□□□ -0.32
VPS27P40343 RRT5YFR032C 870 nt13.05□□□□□ -0.32
VPS27P40343 DAT1YML113W 747 nt13.04□□□□□ -0.32
VPS27P40343 YGR259CYGR259C 441 nt13.03□□□□□ -0.32
VPS27P40343 PAU16YKL224C 372 nt13.01□□□□□ -0.33
VPS27P40343 PAU7YAR020C 168 nt13.01□□□□□ -0.33
VPS27P40343 BMT6YLR063W 1098 nt13□□□□□ -0.33
VPS27P40343 YCR102CYCR102C 1107 nt12.99□□□□□ -0.33
VPS27P40343 NBP35YGL091C 987 nt12.93□□□□□ -0.34
VPS27P40343 AAC1YMR056C 930 nt12.93□□□□□ -0.34
VPS27P40343 YJL225CYJL225C 5277 nt12.91□□□□□ -0.34
VPS27P40343 MIR1YJR077C 936 nt12.88□□□□□ -0.35
VPS27P40343 SHB17YKR043C 816 nt12.87□□□□□ -0.35
VPS27P40343 RTN2YDL204W 1182 nt12.86□□□□□ -0.35
VPS27P40343 SNF1YDR477W 1902 nt12.86□□□□□ -0.35
VPS27P40343 ALG12YNR030W 1656 nt12.85□□□□□ -0.35
VPS27P40343 YDR010CYDR010C 333 nt12.84□□□□□ -0.35
VPS27P40343 IRC24YIR036C 792 nt12.81□□□□□ -0.36
VPS27P40343 THI74YDR438W 1113 nt12.79□□□□□ -0.36
VPS27P40343 SHH4YLR164W 507 nt12.79□□□□□ -0.36
VPS27P40343 PLB1YMR008C 1995 nt12.78□□□□□ -0.36
VPS27P40343 UBA4YHR111W 1323 nt12.76□□□□□ -0.37
VPS27P40343 NAT4YMR069W 858 nt12.75□□□□□ -0.37
VPS27P40343 BIO5YNR056C 1686 nt12.74□□□□□ -0.37
VPS27P40343 ARP6YLR085C 1317 nt12.74□□□□□ -0.37
VPS27P40343 TIR3YIL011W 810 nt12.74□□□□□ -0.37
VPS27P40343 RET2YFR051C 1641 nt12.71□□□□□ -0.37
VPS27P40343 SFA1YDL168W 1161 nt12.71□□□□□ -0.37
VPS27P40343 YHL019W-AYHL019W-A 594 nt12.71□□□□□ -0.37
VPS27P40343 PHO89YBR296C 1725 nt12.71□□□□□ -0.38
VPS27P40343 MSF1YPR047W 1410 nt12.7□□□□□ -0.38
VPS27P40343 YSR3YKR053C 1215 nt12.69□□□□□ -0.38
VPS27P40343 PRO1YDR300C 1287 nt12.68□□□□□ -0.38
VPS27P40343 YFL015W-AYFL015W-A 318 nt12.67□□□□□ -0.38
VPS27P40343 LSC2YGR244C 1284 nt12.65□□□□□ -0.38
VPS27P40343 POM34YLR018C 900 nt12.64□□□□□ -0.39
VPS27P40343 GAP1YKR039W 1809 nt12.62□□□□□ -0.39
Retrieved 100 of 7,029 protein–RNA pairs in 85.5 ms