Protein–RNA interactions for Protein: P38339

RGD1, RHO GTPase-activating protein RGD1, yeastyeast

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RGD1P38339 YLR179CYLR179C 606 nt11.7□□□□□ -0.54
RGD1P38339 RNQ1YCL028W 1218 nt11.7□□□□□ -0.54
RGD1P38339 YJL225CYJL225C 5277 nt11.7□□□□□ -0.54
RGD1P38339 YFL015W-AYFL015W-A 318 nt11.67□□□□□ -0.54
RGD1P38339 FUR4YBR021W 1902 nt11.65□□□□□ -0.54
RGD1P38339 YIH1YCR059C 777 nt11.65□□□□□ -0.54
RGD1P38339 YFR018CYFR018C 1092 nt11.64□□□□□ -0.55
RGD1P38339 RRT5YFR032C 870 nt11.63□□□□□ -0.55
RGD1P38339 RDN37-1RDN37-1 5354 nt11.61□□□□□ -0.55
RGD1P38339 RDN37-2RDN37-2 5354 nt11.61□□□□□ -0.55
RGD1P38339 TAD3YLR316C 969 nt11.61□□□□□ -0.55
RGD1P38339 CRR1YLR213C 1269 nt11.6□□□□□ -0.55
RGD1P38339 AQY1YPR192W 918 nt11.59□□□□□ -0.55
RGD1P38339 YHR056W-AYHR056W-A 435 nt11.58□□□□□ -0.56
RGD1P38339 AHT1YHR093W 549 nt11.56□□□□□ -0.56
RGD1P38339 ERF2YLR246W 1080 nt11.56□□□□□ -0.56
RGD1P38339 CCA1YER168C 1641 nt11.55□□□□□ -0.56
RGD1P38339 MIC10YCL057C-A 294 nt11.54□□□□□ -0.56
RGD1P38339 PAU16YKL224C 372 nt11.52□□□□□ -0.57
RGD1P38339 YLL053CYLL053C 459 nt11.5□□□□□ -0.57
RGD1P38339 WSC2YNL283C 1512 nt11.5□□□□□ -0.57
RGD1P38339 PRP4YPR178W 1398 nt11.48□□□□□ -0.57
RGD1P38339 ATF2YGR177C 1608 nt11.48□□□□□ -0.57
RGD1P38339 FTR1YER145C 1215 nt11.47□□□□□ -0.57
RGD1P38339 HEM12YDR047W 1089 nt11.46□□□□□ -0.57
RGD1P38339 DPS1YLL018C 1674 nt11.44□□□□□ -0.58
RGD1P38339 SNG1YGR197C 1644 nt11.44□□□□□ -0.58
RGD1P38339 RAX1YOR301W 1308 nt11.43□□□□□ -0.58
RGD1P38339 AAC1YMR056C 930 nt11.42□□□□□ -0.58
RGD1P38339 NAR1YNL240C 1476 nt11.41□□□□□ -0.58
RGD1P38339 NME1NME1 340 nt11.41□□□□□ -0.58
RGD1P38339 GAL1YBR020W 1587 nt11.41□□□□□ -0.58
RGD1P38339 PEX25YPL112C 1185 nt11.4□□□□□ -0.58
RGD1P38339 YLR415CYLR415C 339 nt11.39□□□□□ -0.59
RGD1P38339 PRE6YOL038W 765 nt11.39□□□□□ -0.59
RGD1P38339 SPC25YER018C 666 nt11.37□□□□□ -0.59
RGD1P38339 YFL067WYFL067W 528 nt11.37□□□□□ -0.59
RGD1P38339 STB1YNL309W 1263 nt11.37□□□□□ -0.59
RGD1P38339 DDR2YOL052C-A 186 nt11.37□□□□□ -0.59
RGD1P38339 BIO5YNR056C 1686 nt11.36□□□□□ -0.59
RGD1P38339 TRM5YHR070W 1500 nt11.36□□□□□ -0.59
RGD1P38339 GPI16YHR188C 1833 nt11.36□□□□□ -0.59
RGD1P38339 SNF1YDR477W 1902 nt11.36□□□□□ -0.59
RGD1P38339 CCT4YDL143W 1587 nt11.33□□□□□ -0.6
RGD1P38339 BDH1YAL060W 1149 nt11.33□□□□□ -0.6
RGD1P38339 NAT4YMR069W 858 nt11.32□□□□□ -0.6
RGD1P38339 YSP3YOR003W 1437 nt11.32□□□□□ -0.6
RGD1P38339 YDR524C-BYDR524C-B 201 nt11.31□□□□□ -0.6
RGD1P38339 YKR005CYKR005C 1578 nt11.31□□□□□ -0.6
RGD1P38339 YFL066CYFL066C 1179 nt11.3□□□□□ -0.6
RGD1P38339 SWC5YBR231C 912 nt11.3□□□□□ -0.6
RGD1P38339 AGP1YCL025C 1902 nt11.29□□□□□ -0.6
RGD1P38339 PBP1YGR178C 2169 nt11.28□□□□□ -0.6
RGD1P38339 YNL115CYNL115C 1935 nt11.28□□□□□ -0.6
RGD1P38339 YDL086C-AYDL086C-A 435 nt11.27□□□□□ -0.61
RGD1P38339 SBA1YKL117W 651 nt11.25□□□□□ -0.61
RGD1P38339 BMT6YLR063W 1098 nt11.24□□□□□ -0.61
RGD1P38339 VPS75YNL246W 795 nt11.23□□□□□ -0.61
RGD1P38339 VPS60YDR486C 690 nt11.22□□□□□ -0.61
RGD1P38339 ANP1YEL036C 1503 nt11.21□□□□□ -0.61
RGD1P38339 FEN2YCR028C 1539 nt11.19□□□□□ -0.62
RGD1P38339 MIC12YBR262C 321 nt11.19□□□□□ -0.62
RGD1P38339 CYT2YKL087C 675 nt11.18□□□□□ -0.62
RGD1P38339 MSF1YPR047W 1410 nt11.17□□□□□ -0.62
RGD1P38339 YCL074WYCL074W 927 nt11.16□□□□□ -0.62
RGD1P38339 YGR259CYGR259C 441 nt11.16□□□□□ -0.62
RGD1P38339 BNA2YJR078W 1362 nt11.16□□□□□ -0.62
RGD1P38339 THI74YDR438W 1113 nt11.14□□□□□ -0.63
RGD1P38339 DUS1YML080W 1272 nt11.14□□□□□ -0.63
RGD1P38339 IRC24YIR036C 792 nt11.11□□□□□ -0.63
RGD1P38339 MIR1YJR077C 936 nt11.11□□□□□ -0.63
RGD1P38339 PAU7YAR020C 168 nt11.11□□□□□ -0.63
RGD1P38339 ALG3YBL082C 1377 nt11.11□□□□□ -0.63
RGD1P38339 YIR016WYIR016W 798 nt11.09□□□□□ -0.63
RGD1P38339 TIM17YJL143W 477 nt11.09□□□□□ -0.63
RGD1P38339 RDN18-1RDN18-1 1800 nt11.07□□□□□ -0.64
RGD1P38339 RDN18-2RDN18-2 1800 nt11.07□□□□□ -0.64
RGD1P38339 YGR139WYGR139W 339 nt11.05□□□□□ -0.64
RGD1P38339 HHO1YPL127C 777 nt11.05□□□□□ -0.64
RGD1P38339 XDJ1YLR090W 1380 nt11.04□□□□□ -0.64
RGD1P38339 DUT1YBR252W 444 nt11.01□□□□□ -0.65
RGD1P38339 YAT1YAR035W 2064 nt11□□□□□ -0.65
RGD1P38339 CMP2YML057W 1815 nt10.99□□□□□ -0.65
RGD1P38339 STR3YGL184C 1398 nt10.99□□□□□ -0.65
RGD1P38339 DAT1YML113W 747 nt10.98□□□□□ -0.65
RGD1P38339 HSL7YBR133C 2484 nt10.97□□□□□ -0.65
RGD1P38339 UBA4YHR111W 1323 nt10.94□□□□□ -0.66
RGD1P38339 SHM2YLR058C 1410 nt10.92□□□□□ -0.66
RGD1P38339 YGL034CYGL034C 366 nt10.92□□□□□ -0.66
RGD1P38339 GLR1YPL091W 1452 nt10.9□□□□□ -0.66
RGD1P38339 YGR201CYGR201C 678 nt10.9□□□□□ -0.66
RGD1P38339 SHB17YKR043C 816 nt10.89□□□□□ -0.67
RGD1P38339 YSR3YKR053C 1215 nt10.89□□□□□ -0.67
RGD1P38339 YCR087WYCR087W 516 nt10.88□□□□□ -0.67
RGD1P38339 YMR244WYMR244W 1068 nt10.88□□□□□ -0.67
RGD1P38339 GDH3YAL062W 1374 nt10.86□□□□□ -0.67
RGD1P38339 AQY2YLL052C 450 nt10.84□□□□□ -0.67
RGD1P38339 SGT2YOR007C 1041 nt10.82□□□□□ -0.68
RGD1P38339 NDI1YML120C 1542 nt10.82□□□□□ -0.68
RGD1P38339 NIT1YIL164C 600 nt10.79□□□□□ -0.68
Retrieved 100 of 7,029 protein–RNA pairs in 13.4 ms