Protein–RNA interactions for Protein: P38222

RKM3, Ribosomal lysine N-methyltransferase 3, yeastyeast

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RKM3P38222 DDR2YOL052C-A 186 nt12.29□□□□□ -0.44
RKM3P38222 YDL086C-AYDL086C-A 435 nt12.25□□□□□ -0.45
RKM3P38222 MCH5YOR306C 1566 nt12.25□□□□□ -0.45
RKM3P38222 ANP1YEL036C 1503 nt12.22□□□□□ -0.45
RKM3P38222 PRP4YPR178W 1398 nt12.22□□□□□ -0.45
RKM3P38222 PTH1YHR189W 573 nt12.21□□□□□ -0.45
RKM3P38222 AGP1YCL025C 1902 nt12.2□□□□□ -0.46
RKM3P38222 YEL076C-AYEL076C-A 651 nt12.19□□□□□ -0.46
RKM3P38222 YEL076CYEL076C 651 nt12.19□□□□□ -0.46
RKM3P38222 YLR464WYLR464W 651 nt12.19□□□□□ -0.46
RKM3P38222 BNA2YJR078W 1362 nt12.17□□□□□ -0.46
RKM3P38222 DPS1YLL018C 1674 nt12.16□□□□□ -0.46
RKM3P38222 YDR524C-BYDR524C-B 201 nt12.15□□□□□ -0.46
RKM3P38222 SPP1YPL138C 1062 nt12.15□□□□□ -0.46
RKM3P38222 MIC12YBR262C 321 nt12.14□□□□□ -0.47
RKM3P38222 STB1YNL309W 1263 nt12.13□□□□□ -0.47
RKM3P38222 AQY1YPR192W 918 nt12.12□□□□□ -0.47
RKM3P38222 AAC1YMR056C 930 nt12.11□□□□□ -0.47
RKM3P38222 FEN2YCR028C 1539 nt12.11□□□□□ -0.47
RKM3P38222 YKR005CYKR005C 1578 nt12.09□□□□□ -0.47
RKM3P38222 SPC25YER018C 666 nt12.09□□□□□ -0.47
RKM3P38222 YLR179CYLR179C 606 nt12.09□□□□□ -0.47
RKM3P38222 DUS1YML080W 1272 nt12.09□□□□□ -0.47
RKM3P38222 TIM23YNR017W 669 nt12.09□□□□□ -0.47
RKM3P38222 SNF1YDR477W 1902 nt12.07□□□□□ -0.48
RKM3P38222 WSC2YNL283C 1512 nt12.05□□□□□ -0.48
RKM3P38222 VPS60YDR486C 690 nt12.04□□□□□ -0.48
RKM3P38222 GPI16YHR188C 1833 nt12.03□□□□□ -0.48
RKM3P38222 YLR235CYLR235C 399 nt12.03□□□□□ -0.48
RKM3P38222 BIO5YNR056C 1686 nt12.03□□□□□ -0.48
RKM3P38222 YCL074WYCL074W 927 nt12.02□□□□□ -0.49
RKM3P38222 BMT6YLR063W 1098 nt12.02□□□□□ -0.49
RKM3P38222 HHO1YPL127C 777 nt12.02□□□□□ -0.49
RKM3P38222 YIR016WYIR016W 798 nt12.01□□□□□ -0.49
RKM3P38222 NAR1YNL240C 1476 nt12.01□□□□□ -0.49
RKM3P38222 ALG3YBL082C 1377 nt12□□□□□ -0.49
RKM3P38222 CCT4YDL143W 1587 nt11.97□□□□□ -0.49
RKM3P38222 XDJ1YLR090W 1380 nt11.96□□□□□ -0.49
RKM3P38222 YGR259CYGR259C 441 nt11.96□□□□□ -0.49
RKM3P38222 DUT1YBR252W 444 nt11.96□□□□□ -0.49
RKM3P38222 RDN18-1RDN18-1 1800 nt11.95□□□□□ -0.5
RKM3P38222 RDN18-2RDN18-2 1800 nt11.95□□□□□ -0.5
RKM3P38222 AHT1YHR093W 549 nt11.94□□□□□ -0.5
RKM3P38222 SWC5YBR231C 912 nt11.91□□□□□ -0.5
RKM3P38222 YGR201CYGR201C 678 nt11.88□□□□□ -0.51
RKM3P38222 PBP1YGR178C 2169 nt11.88□□□□□ -0.51
RKM3P38222 YKL030WYKL030W 606 nt11.87□□□□□ -0.51
RKM3P38222 STR3YGL184C 1398 nt11.86□□□□□ -0.51
RKM3P38222 IRC24YIR036C 792 nt11.83□□□□□ -0.52
RKM3P38222 YPR064WYPR064W 420 nt11.82□□□□□ -0.52
RKM3P38222 AQY2YLL052C 450 nt11.79□□□□□ -0.52
RKM3P38222 CYT2YKL087C 675 nt11.77□□□□□ -0.53
RKM3P38222 AVT6YER119C 1347 nt11.77□□□□□ -0.53
RKM3P38222 TAD3YLR316C 969 nt11.75□□□□□ -0.53
RKM3P38222 GDH3YAL062W 1374 nt11.73□□□□□ -0.53
RKM3P38222 GOR1YNL274C 1053 nt11.72□□□□□ -0.53
RKM3P38222 YJL225CYJL225C 5277 nt11.69□□□□□ -0.54
RKM3P38222 BDH1YAL060W 1149 nt11.68□□□□□ -0.54
RKM3P38222 SHM2YLR058C 1410 nt11.64□□□□□ -0.55
RKM3P38222 RTN2YDL204W 1182 nt11.64□□□□□ -0.55
RKM3P38222 YAT1YAR035W 2064 nt11.63□□□□□ -0.55
RKM3P38222 YLR415CYLR415C 339 nt11.6□□□□□ -0.55
RKM3P38222 RTG1YOL067C 534 nt11.6□□□□□ -0.55
RKM3P38222 NIT1YIL164C 600 nt11.53□□□□□ -0.56
RKM3P38222 TIM17YJL143W 477 nt11.52□□□□□ -0.57
RKM3P38222 PLB1YMR008C 1995 nt11.52□□□□□ -0.57
RKM3P38222 CMP2YML057W 1815 nt11.51□□□□□ -0.57
RKM3P38222 tL(GAG)GtL(GAG)G 82 nt11.51□□□□□ -0.57
RKM3P38222 YSP3YOR003W 1437 nt11.51□□□□□ -0.57
RKM3P38222 DAT1YML113W 747 nt11.5□□□□□ -0.57
RKM3P38222 NBP35YGL091C 987 nt11.46□□□□□ -0.57
RKM3P38222 SGT2YOR007C 1041 nt11.46□□□□□ -0.57
RKM3P38222 PRM5YIL117C 957 nt11.44□□□□□ -0.58
RKM3P38222 HIF1YLL022C 1158 nt11.42□□□□□ -0.58
RKM3P38222 ARP6YLR085C 1317 nt11.4□□□□□ -0.58
RKM3P38222 YCR102CYCR102C 1107 nt11.4□□□□□ -0.58
RKM3P38222 YNL115CYNL115C 1935 nt11.39□□□□□ -0.59
RKM3P38222 NDI1YML120C 1542 nt11.37□□□□□ -0.59
RKM3P38222 HSL7YBR133C 2484 nt11.36□□□□□ -0.59
RKM3P38222 ALD4YOR374W 1560 nt11.33□□□□□ -0.6
RKM3P38222 HUA1YGR268C 597 nt11.33□□□□□ -0.6
RKM3P38222 UTR1YJR049C 1593 nt11.32□□□□□ -0.6
RKM3P38222 RPC82YPR190C 1965 nt11.32□□□□□ -0.6
RKM3P38222 PEX25YPL112C 1185 nt11.29□□□□□ -0.6
RKM3P38222 SHH4YLR164W 507 nt11.28□□□□□ -0.6
RKM3P38222 YFL066CYFL066C 1179 nt11.27□□□□□ -0.61
RKM3P38222 SPT20YOL148C 1815 nt11.27□□□□□ -0.61
RKM3P38222 RPM1RPM1 483 nt11.25□□□□□ -0.61
RKM3P38222 INA1YLR413W 2028 nt11.23□□□□□ -0.61
RKM3P38222 GAP1YKR039W 1809 nt11.23□□□□□ -0.61
RKM3P38222 PRO1YDR300C 1287 nt11.2□□□□□ -0.62
RKM3P38222 VPS75YNL246W 795 nt11.2□□□□□ -0.62
RKM3P38222 TIR3YIL011W 810 nt11.19□□□□□ -0.62
RKM3P38222 LSC2YGR244C 1284 nt11.15□□□□□ -0.62
RKM3P38222 POM34YLR018C 900 nt11.11□□□□□ -0.63
RKM3P38222 RDN25-1RDN25-1 3396 nt11.11□□□□□ -0.63
RKM3P38222 RDN25-2RDN25-2 3396 nt11.11□□□□□ -0.63
RKM3P38222 SAM35YHR083W 990 nt11.1□□□□□ -0.63
RKM3P38222 ATG15YCR068W 1563 nt11.1□□□□□ -0.63
RKM3P38222 ZRT3YKL175W 1512 nt11.09□□□□□ -0.63
Retrieved 100 of 7,029 protein–RNA pairs in 13.8 ms