Protein–RNA interactions for Protein: P38210

LDB7, Chromatin structure-remodeling complex protein RSC14, yeastyeast

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LDB7P38210 tL(GAG)GtL(GAG)G 82 nt10.9□□□□□ -0.66
LDB7P38210 DDR2YOL052C-A 186 nt10.9□□□□□ -0.66
LDB7P38210 TAD3YLR316C 969 nt10.88□□□□□ -0.67
LDB7P38210 STB1YNL309W 1263 nt10.87□□□□□ -0.67
LDB7P38210 YDR524C-BYDR524C-B 201 nt10.85□□□□□ -0.67
LDB7P38210 HEM12YDR047W 1089 nt10.84□□□□□ -0.67
LDB7P38210 SPC25YER018C 666 nt10.84□□□□□ -0.67
LDB7P38210 YDL086C-AYDL086C-A 435 nt10.83□□□□□ -0.68
LDB7P38210 SNG1YGR197C 1644 nt10.83□□□□□ -0.68
LDB7P38210 MIC10YCL057C-A 294 nt10.82□□□□□ -0.68
LDB7P38210 PAC11YDR488C 1602 nt10.82□□□□□ -0.68
LDB7P38210 GPI16YHR188C 1833 nt10.81□□□□□ -0.68
LDB7P38210 CCT4YDL143W 1587 nt10.79□□□□□ -0.68
LDB7P38210 UBX6YJL048C 1191 nt10.79□□□□□ -0.68
LDB7P38210 ANP1YEL036C 1503 nt10.79□□□□□ -0.68
LDB7P38210 YDR094WYDR094W 336 nt10.78□□□□□ -0.68
LDB7P38210 YFL054CYFL054C 1941 nt10.77□□□□□ -0.69
LDB7P38210 VPS60YDR486C 690 nt10.76□□□□□ -0.69
LDB7P38210 FEN2YCR028C 1539 nt10.75□□□□□ -0.69
LDB7P38210 SWC5YBR231C 912 nt10.75□□□□□ -0.69
LDB7P38210 YHR056W-AYHR056W-A 435 nt10.73□□□□□ -0.69
LDB7P38210 BDH1YAL060W 1149 nt10.71□□□□□ -0.69
LDB7P38210 ALG3YBL082C 1377 nt10.71□□□□□ -0.69
LDB7P38210 YLR415CYLR415C 339 nt10.69□□□□□ -0.7
LDB7P38210 YFR018CYFR018C 1092 nt10.67□□□□□ -0.7
LDB7P38210 YSP3YOR003W 1437 nt10.65□□□□□ -0.7
LDB7P38210 SPT8YLR055C 1809 nt10.65□□□□□ -0.71
LDB7P38210 BNA2YJR078W 1362 nt10.65□□□□□ -0.71
LDB7P38210 RAX1YOR301W 1308 nt10.64□□□□□ -0.71
LDB7P38210 YIR016WYIR016W 798 nt10.64□□□□□ -0.71
LDB7P38210 PEX25YPL112C 1185 nt10.63□□□□□ -0.71
LDB7P38210 PRE6YOL038W 765 nt10.62□□□□□ -0.71
LDB7P38210 YNL115CYNL115C 1935 nt10.6□□□□□ -0.71
LDB7P38210 YFL066CYFL066C 1179 nt10.59□□□□□ -0.71
LDB7P38210 RRT5YFR032C 870 nt10.58□□□□□ -0.72
LDB7P38210 MIC12YBR262C 321 nt10.57□□□□□ -0.72
LDB7P38210 NVJ2YPR091C 2313 nt10.57□□□□□ -0.72
LDB7P38210 PAU16YKL224C 372 nt10.56□□□□□ -0.72
LDB7P38210 SWE1YJL187C 2460 nt10.53□□□□□ -0.72
LDB7P38210 XDJ1YLR090W 1380 nt10.5□□□□□ -0.73
LDB7P38210 TIM17YJL143W 477 nt10.49□□□□□ -0.73
LDB7P38210 HHO1YPL127C 777 nt10.48□□□□□ -0.73
LDB7P38210 CCA1YER168C 1641 nt10.47□□□□□ -0.73
LDB7P38210 YGR201CYGR201C 678 nt10.46□□□□□ -0.73
LDB7P38210 VPS75YNL246W 795 nt10.46□□□□□ -0.73
LDB7P38210 SHM2YLR058C 1410 nt10.45□□□□□ -0.74
LDB7P38210 YFL015W-AYFL015W-A 318 nt10.45□□□□□ -0.74
LDB7P38210 GDH3YAL062W 1374 nt10.41□□□□□ -0.74
LDB7P38210 AGP1YCL025C 1902 nt10.4□□□□□ -0.74
LDB7P38210 AVT6YER119C 1347 nt10.36□□□□□ -0.75
LDB7P38210 GLK1YCL040W 1503 nt10.34□□□□□ -0.75
LDB7P38210 NIT1YIL164C 600 nt10.34□□□□□ -0.75
LDB7P38210 PAU7YAR020C 168 nt10.34□□□□□ -0.75
LDB7P38210 SGT2YOR007C 1041 nt10.34□□□□□ -0.75
LDB7P38210 MIR1YJR077C 936 nt10.33□□□□□ -0.76
LDB7P38210 NAT4YMR069W 858 nt10.32□□□□□ -0.76
LDB7P38210 GOR1YNL274C 1053 nt10.31□□□□□ -0.76
LDB7P38210 YJL225CYJL225C 5277 nt10.31□□□□□ -0.76
LDB7P38210 DUS1YML080W 1272 nt10.3□□□□□ -0.76
LDB7P38210 DUT1YBR252W 444 nt10.3□□□□□ -0.76
LDB7P38210 THI74YDR438W 1113 nt10.28□□□□□ -0.76
LDB7P38210 DAT1YML113W 747 nt10.26□□□□□ -0.77
LDB7P38210 MSF1YPR047W 1410 nt10.24□□□□□ -0.77
LDB7P38210 SHB17YKR043C 816 nt10.23□□□□□ -0.77
LDB7P38210 FUR4YBR021W 1902 nt10.19□□□□□ -0.78
LDB7P38210 UBA4YHR111W 1323 nt10.19□□□□□ -0.78
LDB7P38210 YCL074WYCL074W 927 nt10.19□□□□□ -0.78
LDB7P38210 YCR102CYCR102C 1107 nt10.18□□□□□ -0.78
LDB7P38210 YDR010CYDR010C 333 nt10.18□□□□□ -0.78
LDB7P38210 AQY2YLL052C 450 nt10.15□□□□□ -0.78
LDB7P38210 STR3YGL184C 1398 nt10.14□□□□□ -0.79
LDB7P38210 YSR3YKR053C 1215 nt10.14□□□□□ -0.79
LDB7P38210 RDN18-1RDN18-1 1800 nt10.14□□□□□ -0.79
LDB7P38210 RDN18-2RDN18-2 1800 nt10.14□□□□□ -0.79
LDB7P38210 RET2YFR051C 1641 nt10.12□□□□□ -0.79
LDB7P38210 YGL034CYGL034C 366 nt10.1□□□□□ -0.79
LDB7P38210 PHO89YBR296C 1725 nt10.1□□□□□ -0.79
LDB7P38210 NBP35YGL091C 987 nt10.08□□□□□ -0.8
LDB7P38210 SBA1YKL117W 651 nt10.06□□□□□ -0.8
LDB7P38210 HSP60YLR259C 1719 nt10.06□□□□□ -0.8
LDB7P38210 YCR087WYCR087W 516 nt10.05□□□□□ -0.8
LDB7P38210 XYL2YLR070C 1071 nt10.05□□□□□ -0.8
LDB7P38210 SFA1YDL168W 1161 nt10.02□□□□□ -0.81
LDB7P38210 YHL019W-AYHL019W-A 594 nt10.02□□□□□ -0.81
LDB7P38210 TIR3YIL011W 810 nt10.01□□□□□ -0.81
LDB7P38210 BOR1YNL275W 1731 nt10□□□□□ -0.81
LDB7P38210 SHH4YLR164W 507 nt10□□□□□ -0.81
LDB7P38210 YKR005CYKR005C 1578 nt9.99□□□□□ -0.81
LDB7P38210 RTN2YDL204W 1182 nt9.98□□□□□ -0.81
LDB7P38210 MRP20YDR405W 792 nt9.98□□□□□ -0.81
LDB7P38210 AIM45YPR004C 1035 nt9.98□□□□□ -0.81
LDB7P38210 RBG1YAL036C 1110 nt9.97□□□□□ -0.81
LDB7P38210 COQ2YNR041C 1119 nt9.97□□□□□ -0.81
LDB7P38210 PRP4YPR178W 1398 nt9.97□□□□□ -0.81
LDB7P38210 YGR259CYGR259C 441 nt9.96□□□□□ -0.82
LDB7P38210 NDI1YML120C 1542 nt9.93□□□□□ -0.82
LDB7P38210 LSC2YGR244C 1284 nt9.92□□□□□ -0.82
LDB7P38210 ARP6YLR085C 1317 nt9.91□□□□□ -0.82
LDB7P38210 PRO1YDR300C 1287 nt9.91□□□□□ -0.82
LDB7P38210 POM34YLR018C 900 nt9.91□□□□□ -0.82
Retrieved 100 of 7,029 protein–RNA pairs in 25.4 ms