Protein–RNA interactions for Protein: P27999

RPB9, DNA-directed RNA polymerase II subunit RPB9, yeastyeast

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB9P27999 YNL115CYNL115C 1935 nt8.85□□□□□ -0.99
RPB9P27999 GAL1YBR020W 1587 nt8.85□□□□□ -0.99
RPB9P27999 SPC25YER018C 666 nt8.82□□□□□ -1
RPB9P27999 STB1YNL309W 1263 nt8.82□□□□□ -1
RPB9P27999 RRT12YCR045C 1476 nt8.81□□□□□ -1
RPB9P27999 CCT4YDL143W 1587 nt8.81□□□□□ -1
RPB9P27999 MSF1YPR047W 1410 nt8.8□□□□□ -1
RPB9P27999 TRM5YHR070W 1500 nt8.8□□□□□ -1
RPB9P27999 GPI16YHR188C 1833 nt8.8□□□□□ -1
RPB9P27999 VPS75YNL246W 795 nt8.78□□□□□ -1
RPB9P27999 DDR2YOL052C-A 186 nt8.78□□□□□ -1
RPB9P27999 THI74YDR438W 1113 nt8.77□□□□□ -1.01
RPB9P27999 YDR524C-BYDR524C-B 201 nt8.77□□□□□ -1.01
RPB9P27999 YFL067WYFL067W 528 nt8.77□□□□□ -1.01
RPB9P27999 SWC5YBR231C 912 nt8.77□□□□□ -1.01
RPB9P27999 ERF2YLR246W 1080 nt8.75□□□□□ -1.01
RPB9P27999 MIR1YJR077C 936 nt8.74□□□□□ -1.01
RPB9P27999 YHL050CYHL050C 2094 nt8.73□□□□□ -1.01
RPB9P27999 YDL086C-AYDL086C-A 435 nt8.71□□□□□ -1.02
RPB9P27999 VPS60YDR486C 690 nt8.71□□□□□ -1.02
RPB9P27999 ATF2YGR177C 1608 nt8.71□□□□□ -1.02
RPB9P27999 SEC11YIR022W 504 nt8.68□□□□□ -1.02
RPB9P27999 SPT8YLR055C 1809 nt8.68□□□□□ -1.02
RPB9P27999 FEN2YCR028C 1539 nt8.67□□□□□ -1.02
RPB9P27999 PAU7YAR020C 168 nt8.67□□□□□ -1.02
RPB9P27999 CRR1YLR213C 1269 nt8.67□□□□□ -1.02
RPB9P27999 YMR244WYMR244W 1068 nt8.67□□□□□ -1.02
RPB9P27999 ANP1YEL036C 1503 nt8.65□□□□□ -1.02
RPB9P27999 YJL225CYJL225C 5277 nt8.65□□□□□ -1.02
RPB9P27999 ALG3YBL082C 1377 nt8.64□□□□□ -1.03
RPB9P27999 DAT1YML113W 747 nt8.64□□□□□ -1.03
RPB9P27999 GLR1YPL091W 1452 nt8.64□□□□□ -1.03
RPB9P27999 TIM17YJL143W 477 nt8.61□□□□□ -1.03
RPB9P27999 YGL034CYGL034C 366 nt8.6□□□□□ -1.03
RPB9P27999 RDN37-1RDN37-1 5354 nt8.6□□□□□ -1.03
RPB9P27999 RDN37-2RDN37-2 5354 nt8.6□□□□□ -1.03
RPB9P27999 HEM12YDR047W 1089 nt8.59□□□□□ -1.03
RPB9P27999 SNG1YGR197C 1644 nt8.58□□□□□ -1.04
RPB9P27999 YIR016WYIR016W 798 nt8.58□□□□□ -1.04
RPB9P27999 UBA4YHR111W 1323 nt8.57□□□□□ -1.04
RPB9P27999 BDF1YLR399C 2061 nt8.55□□□□□ -1.04
RPB9P27999 YSR3YKR053C 1215 nt8.54□□□□□ -1.04
RPB9P27999 SHB17YKR043C 816 nt8.53□□□□□ -1.04
RPB9P27999 RBG2YGR173W 1107 nt8.52□□□□□ -1.05
RPB9P27999 NDI1YML120C 1542 nt8.52□□□□□ -1.05
RPB9P27999 YCR087WYCR087W 516 nt8.5□□□□□ -1.05
RPB9P27999 MIC10YCL057C-A 294 nt8.5□□□□□ -1.05
RPB9P27999 NCP1YHR042W 2076 nt8.5□□□□□ -1.05
RPB9P27999 LYS4YDR234W 2082 nt8.49□□□□□ -1.05
RPB9P27999 SHM2YLR058C 1410 nt8.49□□□□□ -1.05
RPB9P27999 PCH2YBR186W 1695 nt8.49□□□□□ -1.05
RPB9P27999 RBG1YAL036C 1110 nt8.47□□□□□ -1.05
RPB9P27999 BNA2YJR078W 1362 nt8.47□□□□□ -1.05
RPB9P27999 XDJ1YLR090W 1380 nt8.47□□□□□ -1.05
RPB9P27999 XYL2YLR070C 1071 nt8.46□□□□□ -1.06
RPB9P27999 YMR226CYMR226C 804 nt8.46□□□□□ -1.06
RPB9P27999 BOP3YNL042W 1191 nt8.45□□□□□ -1.06
RPB9P27999 YDR010CYDR010C 333 nt8.44□□□□□ -1.06
RPB9P27999 RET2YFR051C 1641 nt8.43□□□□□ -1.06
RPB9P27999 SGT2YOR007C 1041 nt8.43□□□□□ -1.06
RPB9P27999 AIM45YPR004C 1035 nt8.42□□□□□ -1.06
RPB9P27999 GUT2YIL155C 1950 nt8.41□□□□□ -1.06
RPB9P27999 PHO89YBR296C 1725 nt8.41□□□□□ -1.06
RPB9P27999 TAT1YBR069C 1860 nt8.4□□□□□ -1.06
RPB9P27999 GDH3YAL062W 1374 nt8.4□□□□□ -1.06
RPB9P27999 NIT1YIL164C 600 nt8.4□□□□□ -1.06
RPB9P27999 MIC12YBR262C 321 nt8.4□□□□□ -1.06
RPB9P27999 YGR201CYGR201C 678 nt8.38□□□□□ -1.07
RPB9P27999 YHR056W-AYHR056W-A 435 nt8.38□□□□□ -1.07
RPB9P27999 RTF1YGL244W 1677 nt8.37□□□□□ -1.07
RPB9P27999 RAX1YOR301W 1308 nt8.36□□□□□ -1.07
RPB9P27999 MRP20YDR405W 792 nt8.36□□□□□ -1.07
RPB9P27999 HHO1YPL127C 777 nt8.34□□□□□ -1.07
RPB9P27999 UME6YDR207C 2511 nt8.33□□□□□ -1.08
RPB9P27999 SAM1YLR180W 1149 nt8.33□□□□□ -1.08
RPB9P27999 YLR111WYLR111W 333 nt8.31□□□□□ -1.08
RPB9P27999 AVT6YER119C 1347 nt8.29□□□□□ -1.08
RPB9P27999 GOR1YNL274C 1053 nt8.27□□□□□ -1.09
RPB9P27999 COQ2YNR041C 1119 nt8.27□□□□□ -1.09
RPB9P27999 YCR102CYCR102C 1107 nt8.26□□□□□ -1.09
RPB9P27999 PIB2YGL023C 1908 nt8.25□□□□□ -1.09
RPB9P27999 RPL4BYDR012W 1089 nt8.24□□□□□ -1.09
RPB9P27999 CLB6YGR109C 1143 nt8.24□□□□□ -1.09
RPB9P27999 RPL4AYBR031W 1089 nt8.24□□□□□ -1.09
RPB9P27999 SFA1YDL168W 1161 nt8.2□□□□□ -1.1
RPB9P27999 SDH5YOL071W 489 nt8.2□□□□□ -1.1
RPB9P27999 PTK1YKL198C 1989 nt8.2□□□□□ -1.1
RPB9P27999 RAD23YEL037C 1197 nt8.19□□□□□ -1.1
RPB9P27999 YHL019W-AYHL019W-A 594 nt8.19□□□□□ -1.1
RPB9P27999 RPS14BYJL191W 417 nt8.15□□□□□ -1.1
RPB9P27999 UTH1YKR042W 1098 nt8.15□□□□□ -1.1
RPB9P27999 TIR3YIL011W 810 nt8.13□□□□□ -1.11
RPB9P27999 YFL054CYFL054C 1941 nt8.13□□□□□ -1.11
RPB9P27999 TSC10YBR265W 963 nt8.11□□□□□ -1.11
RPB9P27999 YLR437C-AYLR437C-A 228 nt8.09□□□□□ -1.11
RPB9P27999 NBP35YGL091C 987 nt8.08□□□□□ -1.12
RPB9P27999 YML089CYML089C 369 nt8.08□□□□□ -1.12
RPB9P27999 AGP1YCL025C 1902 nt8.07□□□□□ -1.12
RPB9P27999 RIB3YDR487C 627 nt8.07□□□□□ -1.12
RPB9P27999 STE4YOR212W 1272 nt8.07□□□□□ -1.12
Retrieved 100 of 7,029 protein–RNA pairs in 11.7 ms