Protein–RNA interactions for Protein: P25339

PUF4, Pumilio homology domain family member 4, yeastyeast

Known RBP RIP-Chip data

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF4P25339 RTG1YOL067C 534 nt11.42□□□□□ -0.58
PUF4P25339 YLR235CYLR235C 399 nt11.41□□□□□ -0.58
PUF4P25339 NME1NME1 340 nt11.41□□□□□ -0.58
PUF4P25339 YFL067WYFL067W 528 nt11.39□□□□□ -0.59
PUF4P25339 TIM23YNR017W 669 nt11.39□□□□□ -0.59 RIP-Chip
PUF4P25339 YDR094WYDR094W 336 nt11.38□□□□□ -0.59
PUF4P25339 HUA1YGR268C 597 nt11.36□□□□□ -0.59
PUF4P25339 DDR2YOL052C-A 186 nt11.36□□□□□ -0.59
PUF4P25339 YLR179CYLR179C 606 nt11.35□□□□□ -0.59
PUF4P25339 YFL015W-AYFL015W-A 318 nt11.33□□□□□ -0.6
PUF4P25339 YDL086C-AYDL086C-A 435 nt11.32□□□□□ -0.6
PUF4P25339 YKL030WYKL030W 606 nt11.32□□□□□ -0.6
PUF4P25339 WSC2YNL283C 1512 nt11.31□□□□□ -0.6
PUF4P25339 ANP1YEL036C 1503 nt11.3□□□□□ -0.6
PUF4P25339 STB1YNL309W 1263 nt11.3□□□□□ -0.6
PUF4P25339 AQY1YPR192W 918 nt11.3□□□□□ -0.6
PUF4P25339 YDR524C-BYDR524C-B 201 nt11.28□□□□□ -0.6
PUF4P25339 RAX1YOR301W 1308 nt11.27□□□□□ -0.61
PUF4P25339 SPC25YER018C 666 nt11.26□□□□□ -0.61
PUF4P25339 CCA1YER168C 1641 nt11.26□□□□□ -0.61
PUF4P25339 AHT1YHR093W 549 nt11.25□□□□□ -0.61
PUF4P25339 FEN2YCR028C 1539 nt11.22□□□□□ -0.61
PUF4P25339 VPS60YDR486C 690 nt11.21□□□□□ -0.61
PUF4P25339 ALG3YBL082C 1377 nt11.18□□□□□ -0.62
PUF4P25339 CCT4YDL143W 1587 nt11.18□□□□□ -0.62
PUF4P25339 GPI16YHR188C 1833 nt11.18□□□□□ -0.62
PUF4P25339 YPR064WYPR064W 420 nt11.16□□□□□ -0.62
PUF4P25339 MIC12YBR262C 321 nt11.16□□□□□ -0.62 RIP-Chip
PUF4P25339 YIR016WYIR016W 798 nt11.14□□□□□ -0.63
PUF4P25339 AGP1YCL025C 1902 nt11.13□□□□□ -0.63
PUF4P25339 BNA2YJR078W 1362 nt11.13□□□□□ -0.63
PUF4P25339 TAD3YLR316C 969 nt11.12□□□□□ -0.63
PUF4P25339 BOR1YNL275W 1731 nt11.12□□□□□ -0.63 RIP-Chip
PUF4P25339 HSP60YLR259C 1719 nt11.11□□□□□ -0.63 RIP-Chip
PUF4P25339 FUR4YBR021W 1902 nt11.1□□□□□ -0.63
PUF4P25339 SWC5YBR231C 912 nt11.09□□□□□ -0.63
PUF4P25339 RPM1RPM1 483 nt11.08□□□□□ -0.64
PUF4P25339 SBA1YKL117W 651 nt11.07□□□□□ -0.64
PUF4P25339 BDH1YAL060W 1149 nt11.04□□□□□ -0.64
PUF4P25339 GLK1YCL040W 1503 nt11.03□□□□□ -0.64
PUF4P25339 HHO1YPL127C 777 nt11.02□□□□□ -0.65
PUF4P25339 tL(GAG)GtL(GAG)G 82 nt10.99□□□□□ -0.65
PUF4P25339 DUT1YBR252W 444 nt10.99□□□□□ -0.65 RIP-Chip
PUF4P25339 XDJ1YLR090W 1380 nt10.98□□□□□ -0.65 RIP-Chip
PUF4P25339 YGR201CYGR201C 678 nt10.93□□□□□ -0.66
PUF4P25339 YLR415CYLR415C 339 nt10.93□□□□□ -0.66
PUF4P25339 DUS1YML080W 1272 nt10.93□□□□□ -0.66 RIP-Chip
PUF4P25339 YSP3YOR003W 1437 nt10.92□□□□□ -0.66
PUF4P25339 YGR139WYGR139W 339 nt10.9□□□□□ -0.66
PUF4P25339 RDN18-1RDN18-1 1800 nt10.87□□□□□ -0.67
PUF4P25339 RDN18-2RDN18-2 1800 nt10.87□□□□□ -0.67
PUF4P25339 GDH3YAL062W 1374 nt10.87□□□□□ -0.67
PUF4P25339 PRP4YPR178W 1398 nt10.87□□□□□ -0.67 RIP-Chip
PUF4P25339 SHM2YLR058C 1410 nt10.86□□□□□ -0.67
PUF4P25339 YCL074WYCL074W 927 nt10.86□□□□□ -0.67
PUF4P25339 RRT5YFR032C 870 nt10.86□□□□□ -0.67
PUF4P25339 PAU16YKL224C 372 nt10.86□□□□□ -0.67
PUF4P25339 AVT6YER119C 1347 nt10.84□□□□□ -0.67
PUF4P25339 YKR005CYKR005C 1578 nt10.82□□□□□ -0.68
PUF4P25339 MCH5YOR306C 1566 nt10.82□□□□□ -0.68 RIP-Chip
PUF4P25339 YNL115CYNL115C 1935 nt10.82□□□□□ -0.68
PUF4P25339 STR3YGL184C 1398 nt10.82□□□□□ -0.68
PUF4P25339 DPS1YLL018C 1674 nt10.82□□□□□ -0.68
PUF4P25339 YFL066CYFL066C 1179 nt10.8□□□□□ -0.68
PUF4P25339 NIT1YIL164C 600 nt10.78□□□□□ -0.68
PUF4P25339 TIM17YJL143W 477 nt10.77□□□□□ -0.69
PUF4P25339 GOR1YNL274C 1053 nt10.77□□□□□ -0.69
PUF4P25339 PEX25YPL112C 1185 nt10.77□□□□□ -0.69
PUF4P25339 ALG12YNR030W 1656 nt10.74□□□□□ -0.69
PUF4P25339 AQY2YLL052C 450 nt10.74□□□□□ -0.69
PUF4P25339 YFR018CYFR018C 1092 nt10.73□□□□□ -0.69
PUF4P25339 YGR259CYGR259C 441 nt10.73□□□□□ -0.69
PUF4P25339 PRE6YOL038W 765 nt10.73□□□□□ -0.69
PUF4P25339 SNF1YDR477W 1902 nt10.73□□□□□ -0.69
PUF4P25339 AAC1YMR056C 930 nt10.72□□□□□ -0.69
PUF4P25339 SGT2YOR007C 1041 nt10.72□□□□□ -0.69
PUF4P25339 YJL225CYJL225C 5277 nt10.71□□□□□ -0.69
PUF4P25339 BMT6YLR063W 1098 nt10.68□□□□□ -0.7
PUF4P25339 DAT1YML113W 747 nt10.67□□□□□ -0.7
PUF4P25339 BIO5YNR056C 1686 nt10.64□□□□□ -0.71
PUF4P25339 VPS75YNL246W 795 nt10.63□□□□□ -0.71
PUF4P25339 NBP35YGL091C 987 nt10.6□□□□□ -0.71 RIP-Chip
PUF4P25339 RDN37-1RDN37-1 5354 nt10.58□□□□□ -0.72
PUF4P25339 RDN37-2RDN37-2 5354 nt10.58□□□□□ -0.72
PUF4P25339 IRC24YIR036C 792 nt10.58□□□□□ -0.72
PUF4P25339 YCR102CYCR102C 1107 nt10.57□□□□□ -0.72
PUF4P25339 RTN2YDL204W 1182 nt10.57□□□□□ -0.72
PUF4P25339 NAT4YMR069W 858 nt10.56□□□□□ -0.72
PUF4P25339 SHH4YLR164W 507 nt10.51□□□□□ -0.73 RIP-Chip
PUF4P25339 PLB1YMR008C 1995 nt10.5□□□□□ -0.73
PUF4P25339 NAR1YNL240C 1476 nt10.49□□□□□ -0.73
PUF4P25339 ARP6YLR085C 1317 nt10.48□□□□□ -0.73
PUF4P25339 YDR010CYDR010C 333 nt10.47□□□□□ -0.73
PUF4P25339 PBP1YGR178C 2169 nt10.46□□□□□ -0.74
PUF4P25339 MIR1YJR077C 936 nt10.45□□□□□ -0.74
PUF4P25339 SHB17YKR043C 816 nt10.45□□□□□ -0.74
PUF4P25339 PAU7YAR020C 168 nt10.45□□□□□ -0.74
PUF4P25339 TIR3YIL011W 810 nt10.4□□□□□ -0.74
PUF4P25339 YMR244WYMR244W 1068 nt10.4□□□□□ -0.74
PUF4P25339 SFA1YDL168W 1161 nt10.39□□□□□ -0.75
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms