Protein–RNA interactions for Protein: P18480

SNF5, SWI/SNF chromatin-remodeling complex subunit SNF5, yeastyeast

Predictions only

Length 905 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SNF5P18480 MSF1YPR047W 1410 nt10.49□□□□□ -0.73
SNF5P18480 YSC84YHR016C 1407 nt10.48□□□□□ -0.73
SNF5P18480 FTR1YER145C 1215 nt10.47□□□□□ -0.73
SNF5P18480 MIR1YJR077C 936 nt10.45□□□□□ -0.74
SNF5P18480 YLR415CYLR415C 339 nt10.45□□□□□ -0.74
SNF5P18480 YMR244WYMR244W 1068 nt10.45□□□□□ -0.74
SNF5P18480 GAL1YBR020W 1587 nt10.43□□□□□ -0.74
SNF5P18480 THI74YDR438W 1113 nt10.42□□□□□ -0.74
SNF5P18480 BIO4YNR057C 714 nt10.42□□□□□ -0.74
SNF5P18480 SPC25YER018C 666 nt10.41□□□□□ -0.74
SNF5P18480 YNL195CYNL195C 786 nt10.39□□□□□ -0.75
SNF5P18480 CCT4YDL143W 1587 nt10.39□□□□□ -0.75
SNF5P18480 VPS75YNL246W 795 nt10.38□□□□□ -0.75
SNF5P18480 STB1YNL309W 1263 nt10.38□□□□□ -0.75
SNF5P18480 PCH2YBR186W 1695 nt10.36□□□□□ -0.75
SNF5P18480 TRM5YHR070W 1500 nt10.36□□□□□ -0.75
SNF5P18480 GUT2YIL155C 1950 nt10.34□□□□□ -0.75
SNF5P18480 SIM1YIL123W 1431 nt10.33□□□□□ -0.76
SNF5P18480 RRT12YCR045C 1476 nt10.32□□□□□ -0.76
SNF5P18480 GPI16YHR188C 1833 nt10.31□□□□□ -0.76
SNF5P18480 YDR524C-BYDR524C-B 201 nt10.3□□□□□ -0.76
SNF5P18480 SEC11YIR022W 504 nt10.29□□□□□ -0.76
SNF5P18480 GLR1YPL091W 1452 nt10.29□□□□□ -0.76
SNF5P18480 VPS60YDR486C 690 nt10.28□□□□□ -0.76
SNF5P18480 DAT1YML113W 747 nt10.28□□□□□ -0.76
SNF5P18480 ATF2YGR177C 1608 nt10.27□□□□□ -0.77
SNF5P18480 DDR2YOL052C-A 186 nt10.26□□□□□ -0.77
SNF5P18480 SPT8YLR055C 1809 nt10.26□□□□□ -0.77
SNF5P18480 YFL067WYFL067W 528 nt10.25□□□□□ -0.77
SNF5P18480 SWC5YBR231C 912 nt10.25□□□□□ -0.77
SNF5P18480 ALG3YBL082C 1377 nt10.25□□□□□ -0.77
SNF5P18480 YDL086C-AYDL086C-A 435 nt10.23□□□□□ -0.77
SNF5P18480 RBG2YGR173W 1107 nt10.23□□□□□ -0.77
SNF5P18480 YHL050CYHL050C 2094 nt10.22□□□□□ -0.77
SNF5P18480 YGL034CYGL034C 366 nt10.22□□□□□ -0.77
SNF5P18480 ERF2YLR246W 1080 nt10.22□□□□□ -0.77
SNF5P18480 FEN2YCR028C 1539 nt10.21□□□□□ -0.78
SNF5P18480 ANP1YEL036C 1503 nt10.2□□□□□ -0.78
SNF5P18480 UBA4YHR111W 1323 nt10.19□□□□□ -0.78
SNF5P18480 RDN37-1RDN37-1 5354 nt10.19□□□□□ -0.78
SNF5P18480 RDN37-2RDN37-2 5354 nt10.19□□□□□ -0.78
SNF5P18480 PIB2YGL023C 1908 nt10.19□□□□□ -0.78
SNF5P18480 CRR1YLR213C 1269 nt10.16□□□□□ -0.78
SNF5P18480 PAU7YAR020C 168 nt10.15□□□□□ -0.78
SNF5P18480 CSM2YIL132C 642 nt10.13□□□□□ -0.79
SNF5P18480 NDI1YML120C 1542 nt10.12□□□□□ -0.79
SNF5P18480 YIR016WYIR016W 798 nt10.11□□□□□ -0.79
SNF5P18480 SHB17YKR043C 816 nt10.11□□□□□ -0.79
SNF5P18480 TIM17YJL143W 477 nt10.09□□□□□ -0.79
SNF5P18480 SNG1YGR197C 1644 nt10.08□□□□□ -0.8
SNF5P18480 YSR3YKR053C 1215 nt10.08□□□□□ -0.8
SNF5P18480 YDR010CYDR010C 333 nt10.06□□□□□ -0.8
SNF5P18480 XYL2YLR070C 1071 nt10.06□□□□□ -0.8
SNF5P18480 RBG1YAL036C 1110 nt10.05□□□□□ -0.8
SNF5P18480 YMR226CYMR226C 804 nt10.05□□□□□ -0.8
SNF5P18480 HEM12YDR047W 1089 nt10.03□□□□□ -0.8
SNF5P18480 MIC10YCL057C-A 294 nt10.02□□□□□ -0.81
SNF5P18480 UME6YDR207C 2511 nt10.02□□□□□ -0.81
SNF5P18480 SHM2YLR058C 1410 nt10.01□□□□□ -0.81
SNF5P18480 RTF1YGL244W 1677 nt10.01□□□□□ -0.81
SNF5P18480 LYS4YDR234W 2082 nt10□□□□□ -0.81
SNF5P18480 NCP1YHR042W 2076 nt10□□□□□ -0.81
SNF5P18480 RET2YFR051C 1641 nt9.99□□□□□ -0.81
SNF5P18480 YCR087WYCR087W 516 nt9.98□□□□□ -0.81
SNF5P18480 SAM1YLR180W 1149 nt9.98□□□□□ -0.81
SNF5P18480 NIT1YIL164C 600 nt9.97□□□□□ -0.81
SNF5P18480 AIM45YPR004C 1035 nt9.97□□□□□ -0.81
SNF5P18480 SGT2YOR007C 1041 nt9.95□□□□□ -0.82
SNF5P18480 XDJ1YLR090W 1380 nt9.94□□□□□ -0.82
SNF5P18480 PHO89YBR296C 1725 nt9.93□□□□□ -0.82
SNF5P18480 PTK1YKL198C 1989 nt9.9□□□□□ -0.83
SNF5P18480 BOR1YNL275W 1731 nt9.88□□□□□ -0.83
SNF5P18480 BOP3YNL042W 1191 nt9.88□□□□□ -0.83
SNF5P18480 MIC12YBR262C 321 nt9.88□□□□□ -0.83
SNF5P18480 GDH3YAL062W 1374 nt9.86□□□□□ -0.83
SNF5P18480 RAD51YER095W 1203 nt9.85□□□□□ -0.83
SNF5P18480 COQ2YNR041C 1119 nt9.83□□□□□ -0.84
SNF5P18480 MRP20YDR405W 792 nt9.82□□□□□ -0.84
SNF5P18480 BNA2YJR078W 1362 nt9.8□□□□□ -0.84
SNF5P18480 YHR056W-AYHR056W-A 435 nt9.8□□□□□ -0.84
SNF5P18480 YGR201CYGR201C 678 nt9.79□□□□□ -0.84
SNF5P18480 YLR111WYLR111W 333 nt9.78□□□□□ -0.84
SNF5P18480 PAU21YOR394W 495 nt9.78□□□□□ -0.84
SNF5P18480 PAU22YPL282C 495 nt9.78□□□□□ -0.84
SNF5P18480 RPM1RPM1 483 nt9.77□□□□□ -0.85
SNF5P18480 SFA1YDL168W 1161 nt9.76□□□□□ -0.85
SNF5P18480 MET8YBR213W 825 nt9.73□□□□□ -0.85
SNF5P18480 HHO1YPL127C 777 nt9.72□□□□□ -0.85
SNF5P18480 RAX1YOR301W 1308 nt9.72□□□□□ -0.85
SNF5P18480 RPL4BYDR012W 1089 nt9.71□□□□□ -0.86
SNF5P18480 YLR437C-AYLR437C-A 228 nt9.71□□□□□ -0.86
SNF5P18480 RPL4AYBR031W 1089 nt9.71□□□□□ -0.86
SNF5P18480 RAD23YEL037C 1197 nt9.7□□□□□ -0.86
SNF5P18480 YNR029CYNR029C 1290 nt9.7□□□□□ -0.86
SNF5P18480 YLR349WYLR349W 507 nt9.69□□□□□ -0.86
SNF5P18480 ARO7YPR060C 771 nt9.69□□□□□ -0.86
SNF5P18480 AVT6YER119C 1347 nt9.68□□□□□ -0.86
SNF5P18480 CLB6YGR109C 1143 nt9.68□□□□□ -0.86
SNF5P18480 STE4YOR212W 1272 nt9.68□□□□□ -0.86
SNF5P18480 YCR102CYCR102C 1107 nt9.67□□□□□ -0.86
Retrieved 100 of 7,029 protein–RNA pairs in 9.5 ms