Protein–RNA interactions for Protein: P0C2J4

TY2A-LR1, Transposon Ty2-LR1 Gag polyprotein, yeastyeast

Predictions only

Length 438 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY2A-LR1P0C2J4 YFL054CYFL054C 1941 nt10.45□□□□□ -0.74
TY2A-LR1P0C2J4 HEM12YDR047W 1089 nt10.45□□□□□ -0.74
TY2A-LR1P0C2J4 WSC2YNL283C 1512 nt10.44□□□□□ -0.74
TY2A-LR1P0C2J4 NVJ2YPR091C 2313 nt10.44□□□□□ -0.74
TY2A-LR1P0C2J4 AHT1YHR093W 549 nt10.43□□□□□ -0.74
TY2A-LR1P0C2J4 STB1YNL309W 1263 nt10.42□□□□□ -0.74
TY2A-LR1P0C2J4 SNG1YGR197C 1644 nt10.41□□□□□ -0.74
TY2A-LR1P0C2J4 YDL086C-AYDL086C-A 435 nt10.4□□□□□ -0.74
TY2A-LR1P0C2J4 YDR524C-BYDR524C-B 201 nt10.4□□□□□ -0.74
TY2A-LR1P0C2J4 MIC10YCL057C-A 294 nt10.4□□□□□ -0.74
TY2A-LR1P0C2J4 TAD3YLR316C 969 nt10.39□□□□□ -0.75
TY2A-LR1P0C2J4 SPC25YER018C 666 nt10.38□□□□□ -0.75
TY2A-LR1P0C2J4 tL(GAG)GtL(GAG)G 82 nt10.37□□□□□ -0.75
TY2A-LR1P0C2J4 GPI16YHR188C 1833 nt10.37□□□□□ -0.75
TY2A-LR1P0C2J4 ANP1YEL036C 1503 nt10.35□□□□□ -0.75
TY2A-LR1P0C2J4 YHR056W-AYHR056W-A 435 nt10.34□□□□□ -0.75
TY2A-LR1P0C2J4 CCT4YDL143W 1587 nt10.34□□□□□ -0.75
TY2A-LR1P0C2J4 SPT8YLR055C 1809 nt10.33□□□□□ -0.76
TY2A-LR1P0C2J4 SWC5YBR231C 912 nt10.32□□□□□ -0.76
TY2A-LR1P0C2J4 VPS60YDR486C 690 nt10.31□□□□□ -0.76
TY2A-LR1P0C2J4 FEN2YCR028C 1539 nt10.31□□□□□ -0.76
TY2A-LR1P0C2J4 RAX1YOR301W 1308 nt10.27□□□□□ -0.77
TY2A-LR1P0C2J4 BNA2YJR078W 1362 nt10.26□□□□□ -0.77
TY2A-LR1P0C2J4 ALG3YBL082C 1377 nt10.25□□□□□ -0.77
TY2A-LR1P0C2J4 YLR415CYLR415C 339 nt10.23□□□□□ -0.77
TY2A-LR1P0C2J4 BDH1YAL060W 1149 nt10.22□□□□□ -0.77
TY2A-LR1P0C2J4 YIR016WYIR016W 798 nt10.21□□□□□ -0.77
TY2A-LR1P0C2J4 SWE1YJL187C 2460 nt10.21□□□□□ -0.78
TY2A-LR1P0C2J4 MIC12YBR262C 321 nt10.17□□□□□ -0.78
TY2A-LR1P0C2J4 YDR094WYDR094W 336 nt10.16□□□□□ -0.78
TY2A-LR1P0C2J4 YSP3YOR003W 1437 nt10.14□□□□□ -0.79
TY2A-LR1P0C2J4 YJL225CYJL225C 5277 nt10.13□□□□□ -0.79
TY2A-LR1P0C2J4 UBX6YJL048C 1191 nt10.12□□□□□ -0.79
TY2A-LR1P0C2J4 PEX25YPL112C 1185 nt10.12□□□□□ -0.79
TY2A-LR1P0C2J4 CCA1YER168C 1641 nt10.11□□□□□ -0.79
TY2A-LR1P0C2J4 YFR018CYFR018C 1092 nt10.11□□□□□ -0.79
TY2A-LR1P0C2J4 HHO1YPL127C 777 nt10.1□□□□□ -0.79
TY2A-LR1P0C2J4 YNL115CYNL115C 1935 nt10.09□□□□□ -0.79
TY2A-LR1P0C2J4 XDJ1YLR090W 1380 nt10.07□□□□□ -0.8
TY2A-LR1P0C2J4 YGR201CYGR201C 678 nt10.07□□□□□ -0.8
TY2A-LR1P0C2J4 YFL066CYFL066C 1179 nt10.06□□□□□ -0.8
TY2A-LR1P0C2J4 TIM17YJL143W 477 nt10.05□□□□□ -0.8
TY2A-LR1P0C2J4 PRE6YOL038W 765 nt10.04□□□□□ -0.8
TY2A-LR1P0C2J4 RRT5YFR032C 870 nt10.02□□□□□ -0.81
TY2A-LR1P0C2J4 SHM2YLR058C 1410 nt10.01□□□□□ -0.81
TY2A-LR1P0C2J4 GDH3YAL062W 1374 nt10.01□□□□□ -0.81
TY2A-LR1P0C2J4 AGP1YCL025C 1902 nt9.99□□□□□ -0.81
TY2A-LR1P0C2J4 VPS75YNL246W 795 nt9.98□□□□□ -0.81
TY2A-LR1P0C2J4 PAU16YKL224C 372 nt9.97□□□□□ -0.81
TY2A-LR1P0C2J4 DUS1YML080W 1272 nt9.97□□□□□ -0.81
TY2A-LR1P0C2J4 AVT6YER119C 1347 nt9.97□□□□□ -0.81
TY2A-LR1P0C2J4 GOR1YNL274C 1053 nt9.94□□□□□ -0.82
TY2A-LR1P0C2J4 SGT2YOR007C 1041 nt9.9□□□□□ -0.82
TY2A-LR1P0C2J4 FUR4YBR021W 1902 nt9.9□□□□□ -0.83
TY2A-LR1P0C2J4 NIT1YIL164C 600 nt9.89□□□□□ -0.83
TY2A-LR1P0C2J4 PAU7YAR020C 168 nt9.89□□□□□ -0.83
TY2A-LR1P0C2J4 DUT1YBR252W 444 nt9.89□□□□□ -0.83
TY2A-LR1P0C2J4 YCL074WYCL074W 927 nt9.85□□□□□ -0.83
TY2A-LR1P0C2J4 DAT1YML113W 747 nt9.83□□□□□ -0.84
TY2A-LR1P0C2J4 GLK1YCL040W 1503 nt9.82□□□□□ -0.84
TY2A-LR1P0C2J4 MIR1YJR077C 936 nt9.81□□□□□ -0.84
TY2A-LR1P0C2J4 AQY2YLL052C 450 nt9.8□□□□□ -0.84
TY2A-LR1P0C2J4 HSP60YLR259C 1719 nt9.79□□□□□ -0.84
TY2A-LR1P0C2J4 YFL015W-AYFL015W-A 318 nt9.79□□□□□ -0.84
TY2A-LR1P0C2J4 NAT4YMR069W 858 nt9.79□□□□□ -0.84
TY2A-LR1P0C2J4 BOR1YNL275W 1731 nt9.79□□□□□ -0.84
TY2A-LR1P0C2J4 STR3YGL184C 1398 nt9.77□□□□□ -0.84
TY2A-LR1P0C2J4 YCR102CYCR102C 1107 nt9.77□□□□□ -0.85
TY2A-LR1P0C2J4 THI74YDR438W 1113 nt9.76□□□□□ -0.85
TY2A-LR1P0C2J4 SHB17YKR043C 816 nt9.76□□□□□ -0.85
TY2A-LR1P0C2J4 RDN18-1RDN18-1 1800 nt9.76□□□□□ -0.85
TY2A-LR1P0C2J4 RDN18-2RDN18-2 1800 nt9.76□□□□□ -0.85
TY2A-LR1P0C2J4 MSF1YPR047W 1410 nt9.71□□□□□ -0.86
TY2A-LR1P0C2J4 YDR010CYDR010C 333 nt9.7□□□□□ -0.86
TY2A-LR1P0C2J4 UBA4YHR111W 1323 nt9.7□□□□□ -0.86
TY2A-LR1P0C2J4 PRP4YPR178W 1398 nt9.7□□□□□ -0.86
TY2A-LR1P0C2J4 YKR005CYKR005C 1578 nt9.69□□□□□ -0.86
TY2A-LR1P0C2J4 NBP35YGL091C 987 nt9.68□□□□□ -0.86
TY2A-LR1P0C2J4 UME6YDR207C 2511 nt9.67□□□□□ -0.86
TY2A-LR1P0C2J4 RDN37-1RDN37-1 5354 nt9.67□□□□□ -0.86
TY2A-LR1P0C2J4 RDN37-2RDN37-2 5354 nt9.67□□□□□ -0.86
TY2A-LR1P0C2J4 YGR259CYGR259C 441 nt9.66□□□□□ -0.86
TY2A-LR1P0C2J4 YSR3YKR053C 1215 nt9.66□□□□□ -0.86
TY2A-LR1P0C2J4 BMT6YLR063W 1098 nt9.66□□□□□ -0.86
TY2A-LR1P0C2J4 RET2YFR051C 1641 nt9.65□□□□□ -0.86
TY2A-LR1P0C2J4 RTN2YDL204W 1182 nt9.64□□□□□ -0.87
TY2A-LR1P0C2J4 PHO89YBR296C 1725 nt9.64□□□□□ -0.87
TY2A-LR1P0C2J4 DPS1YLL018C 1674 nt9.62□□□□□ -0.87
TY2A-LR1P0C2J4 TIR3YIL011W 810 nt9.61□□□□□ -0.87
TY2A-LR1P0C2J4 YGL034CYGL034C 366 nt9.59□□□□□ -0.87
TY2A-LR1P0C2J4 YCR087WYCR087W 516 nt9.58□□□□□ -0.88
TY2A-LR1P0C2J4 YHL019W-AYHL019W-A 594 nt9.58□□□□□ -0.88
TY2A-LR1P0C2J4 SFA1YDL168W 1161 nt9.57□□□□□ -0.88
TY2A-LR1P0C2J4 XYL2YLR070C 1071 nt9.57□□□□□ -0.88
TY2A-LR1P0C2J4 SHH4YLR164W 507 nt9.57□□□□□ -0.88
TY2A-LR1P0C2J4 AAC1YMR056C 930 nt9.55□□□□□ -0.88
TY2A-LR1P0C2J4 ARP6YLR085C 1317 nt9.55□□□□□ -0.88
TY2A-LR1P0C2J4 MRP20YDR405W 792 nt9.53□□□□□ -0.88
TY2A-LR1P0C2J4 LSC2YGR244C 1284 nt9.53□□□□□ -0.88
TY2A-LR1P0C2J4 PLB1YMR008C 1995 nt9.52□□□□□ -0.89
Retrieved 100 of 7,029 protein–RNA pairs in 15.1 ms