Protein–RNA interactions for Protein: P04943

Ig kappa chain V-VI region NQ6-8.3.1, mousemouse

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04943 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC21.3■■□□□ 1
P04943 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
P04943 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
P04943 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
P04943 Gm12184-201ENSMUST00000104959 1310 ntAPPRIS P1 BASIC21.28■■□□□ 1
P04943 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
P04943 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
P04943 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
P04943 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
P04943 Gm8109-201ENSMUST00000194076 746 ntBASIC21.25■□□□□ 0.99
P04943 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
P04943 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
P04943 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC21.23■□□□□ 0.99
P04943 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
P04943 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
P04943 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
P04943 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
P04943 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
P04943 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
P04943 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
P04943 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
P04943 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
P04943 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
P04943 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
P04943 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
P04943 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
P04943 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
P04943 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
P04943 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
P04943 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
P04943 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC21.05■□□□□ 0.96
P04943 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
P04943 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
P04943 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.02■□□□□ 0.96
P04943 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
P04943 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
P04943 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
P04943 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
P04943 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
P04943 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P04943 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
P04943 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
P04943 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
P04943 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04943 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04943 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
P04943 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
P04943 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC20.93■□□□□ 0.94
P04943 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC20.92■□□□□ 0.94
P04943 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
P04943 Ywhaz-204ENSMUST00000110362 2122 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
P04943 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
P04943 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
P04943 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P04943 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
P04943 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
P04943 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
P04943 Peli2-204ENSMUST00000226513 1320 ntBASIC20.89■□□□□ 0.93
P04943 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04943 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
P04943 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
P04943 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
P04943 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC20.86■□□□□ 0.93
P04943 AC153504.1-201ENSMUST00000218379 2290 ntBASIC20.84■□□□□ 0.93
P04943 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
P04943 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC20.84■□□□□ 0.93
P04943 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC20.82■□□□□ 0.92
P04943 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04943 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04943 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
P04943 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
P04943 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
P04943 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04943 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
P04943 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04943 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC20.8■□□□□ 0.92
P04943 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
P04943 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
P04943 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC20.79■□□□□ 0.92
P04943 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
P04943 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04943 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
P04943 Gm24804-201ENSMUST00000174982 85 ntBASIC20.75■□□□□ 0.91
P04943 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC20.74■□□□□ 0.91
P04943 Gnas-207ENSMUST00000109085 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P04943 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P04943 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
P04943 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
P04943 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
P04943 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
P04943 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
P04943 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
P04943 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
P04943 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
P04943 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC20.66■□□□□ 0.9
P04943 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
P04943 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
P04943 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
P04943 Reps1-206ENSMUST00000154718 2402 ntTSL 5 BASIC20.65■□□□□ 0.9
P04943 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 87.1 ms