Protein–RNA interactions for Protein: P00560

PGK1, Phosphoglycerate kinase, yeastyeast

Known RBP Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PGK1P00560 PRE6YOL038W 765 nt12.09□□□□□ -0.47
PGK1P00560 ATF2YGR177C 1608 nt12.08□□□□□ -0.48
PGK1P00560 STB1YNL309W 1263 nt12.07□□□□□ -0.48
PGK1P00560 DDR2YOL052C-A 186 nt12.07□□□□□ -0.48
PGK1P00560 YFL067WYFL067W 528 nt12.06□□□□□ -0.48
PGK1P00560 SPC25YER018C 666 nt12.05□□□□□ -0.48
PGK1P00560 YDR524C-BYDR524C-B 201 nt12.04□□□□□ -0.48
PGK1P00560 CRR1YLR213C 1269 nt12.04□□□□□ -0.48
PGK1P00560 NCP1YHR042W 2076 nt12.03□□□□□ -0.48
PGK1P00560 CCT4YDL143W 1587 nt12.02□□□□□ -0.49
PGK1P00560 BDH1YAL060W 1149 nt12.02□□□□□ -0.49
PGK1P00560 GPI16YHR188C 1833 nt12.02□□□□□ -0.49
PGK1P00560 YLR415CYLR415C 339 nt12□□□□□ -0.49
PGK1P00560 PEX25YPL112C 1185 nt12□□□□□ -0.49
PGK1P00560 YFL066CYFL066C 1179 nt11.99□□□□□ -0.49
PGK1P00560 YDL086C-AYDL086C-A 435 nt11.98□□□□□ -0.49
PGK1P00560 BOP3YNL042W 1191 nt11.98□□□□□ -0.49
PGK1P00560 SWC5YBR231C 912 nt11.98□□□□□ -0.49
PGK1P00560 YSP3YOR003W 1437 nt11.97□□□□□ -0.49
PGK1P00560 RTF1YGL244W 1677 nt11.97□□□□□ -0.49
PGK1P00560 VPS60YDR486C 690 nt11.96□□□□□ -0.49
PGK1P00560 YNL115CYNL115C 1935 nt11.94□□□□□ -0.5
PGK1P00560 HEM12YDR047W 1089 nt11.93□□□□□ -0.5
PGK1P00560 ANP1YEL036C 1503 nt11.92□□□□□ -0.5
PGK1P00560 LYS4YDR234W 2082 nt11.92□□□□□ -0.5
PGK1P00560 SNG1YGR197C 1644 nt11.92□□□□□ -0.5
PGK1P00560 FEN2YCR028C 1539 nt11.91□□□□□ -0.5
PGK1P00560 PIB2YGL023C 1908 nt11.91□□□□□ -0.5
PGK1P00560 MIC10YCL057C-A 294 nt11.9□□□□□ -0.5
PGK1P00560 ALG3YBL082C 1377 nt11.9□□□□□ -0.5
PGK1P00560 YIR016WYIR016W 798 nt11.8□□□□□ -0.52
PGK1P00560 NAT4YMR069W 858 nt11.79□□□□□ -0.52
PGK1P00560 SPT8YLR055C 1809 nt11.79□□□□□ -0.52
PGK1P00560 GLK1YCL040W 1503 nt11.78□□□□□ -0.52
PGK1P00560 VPS75YNL246W 795 nt11.78□□□□□ -0.52
PGK1P00560 SBA1YKL117W 651 nt11.76□□□□□ -0.53
PGK1P00560 PTK1YKL198C 1989 nt11.74□□□□□ -0.53
PGK1P00560 YHR056W-AYHR056W-A 435 nt11.72□□□□□ -0.53
PGK1P00560 BNA2YJR078W 1362 nt11.71□□□□□ -0.53
PGK1P00560 TIM17YJL143W 477 nt11.71□□□□□ -0.53
PGK1P00560 MIR1YJR077C 936 nt11.71□□□□□ -0.53
PGK1P00560 THI74YDR438W 1113 nt11.68□□□□□ -0.54
PGK1P00560 MSF1YPR047W 1410 nt11.68□□□□□ -0.54
PGK1P00560 PAU7YAR020C 168 nt11.66□□□□□ -0.54
PGK1P00560 RAX1YOR301W 1308 nt11.64□□□□□ -0.55
PGK1P00560 XDJ1YLR090W 1380 nt11.64□□□□□ -0.55
PGK1P00560 SHM2YLR058C 1410 nt11.63□□□□□ -0.55
PGK1P00560 MIC12YBR262C 321 nt11.63□□□□□ -0.55
PGK1P00560 YFL054CYFL054C 1941 nt11.62□□□□□ -0.55
PGK1P00560 GDH3YAL062W 1374 nt11.55□□□□□ -0.56
PGK1P00560 DAT1YML113W 747 nt11.55□□□□□ -0.56
PGK1P00560 HHO1YPL127C 777 nt11.55□□□□□ -0.56
PGK1P00560 YGR201CYGR201C 678 nt11.53□□□□□ -0.56
PGK1P00560 SGT2YOR007C 1041 nt11.53□□□□□ -0.56
PGK1P00560 SHB17YKR043C 816 nt11.52□□□□□ -0.57
PGK1P00560 NIT1YIL164C 600 nt11.51□□□□□ -0.57
PGK1P00560 UBA4YHR111W 1323 nt11.51□□□□□ -0.57
PGK1P00560 YSR3YKR053C 1215 nt11.46□□□□□ -0.57
PGK1P00560 AVT6YER119C 1347 nt11.45□□□□□ -0.58
PGK1P00560 YGL034CYGL034C 366 nt11.45□□□□□ -0.58
PGK1P00560 YDR010CYDR010C 333 nt11.44□□□□□ -0.58
PGK1P00560 UME6YDR207C 2511 nt11.42□□□□□ -0.58
PGK1P00560 CCA1YER168C 1641 nt11.4□□□□□ -0.58
PGK1P00560 GOR1YNL274C 1053 nt11.4□□□□□ -0.58
PGK1P00560 XYL2YLR070C 1071 nt11.38□□□□□ -0.59
PGK1P00560 RET2YFR051C 1641 nt11.37□□□□□ -0.59
PGK1P00560 PHO89YBR296C 1725 nt11.36□□□□□ -0.59
PGK1P00560 SWE1YJL187C 2460 nt11.36□□□□□ -0.59
PGK1P00560 AGP1YCL025C 1902 nt11.36□□□□□ -0.59
PGK1P00560 YCR087WYCR087W 516 nt11.33□□□□□ -0.6
PGK1P00560 RBG1YAL036C 1110 nt11.33□□□□□ -0.6
PGK1P00560 YMR244WYMR244W 1068 nt11.33□□□□□ -0.6
PGK1P00560 GLR1YPL091W 1452 nt11.32□□□□□ -0.6
PGK1P00560 NDI1YML120C 1542 nt11.32□□□□□ -0.6
PGK1P00560 DUT1YBR252W 444 nt11.32□□□□□ -0.6
PGK1P00560 YCR102CYCR102C 1107 nt11.29□□□□□ -0.6
PGK1P00560 BOR1YNL275W 1731 nt11.28□□□□□ -0.6
PGK1P00560 AIM45YPR004C 1035 nt11.27□□□□□ -0.61
PGK1P00560 DUS1YML080W 1272 nt11.24□□□□□ -0.61
PGK1P00560 MRP20YDR405W 792 nt11.23□□□□□ -0.61
PGK1P00560 SFA1YDL168W 1161 nt11.2□□□□□ -0.62
PGK1P00560 COQ2YNR041C 1119 nt11.2□□□□□ -0.62
PGK1P00560 YHL019W-AYHL019W-A 594 nt11.18□□□□□ -0.62
PGK1P00560 NBP35YGL091C 987 nt11.14□□□□□ -0.63
PGK1P00560 RBG2YGR173W 1107 nt11.14□□□□□ -0.63
PGK1P00560 AQY2YLL052C 450 nt11.13□□□□□ -0.63
PGK1P00560 YJL225CYJL225C 5277 nt11.12□□□□□ -0.63
PGK1P00560 TIR3YIL011W 810 nt11.11□□□□□ -0.63
PGK1P00560 SHH4YLR164W 507 nt11.11□□□□□ -0.63
PGK1P00560 STR3YGL184C 1398 nt11.1□□□□□ -0.63
PGK1P00560 YCL074WYCL074W 927 nt11.09□□□□□ -0.63
PGK1P00560 RPL4BYDR012W 1089 nt11.08□□□□□ -0.64
PGK1P00560 RPL4AYBR031W 1089 nt11.08□□□□□ -0.64
PGK1P00560 RDN18-1RDN18-1 1800 nt11.07□□□□□ -0.64
PGK1P00560 RDN18-2RDN18-2 1800 nt11.07□□□□□ -0.64
PGK1P00560 YMR226CYMR226C 804 nt11.05□□□□□ -0.64
PGK1P00560 CLB6YGR109C 1143 nt11.04□□□□□ -0.64
PGK1P00560 TOM6YOR045W 186 nt11.03□□□□□ -0.64
PGK1P00560 HSP60YLR259C 1719 nt11.03□□□□□ -0.64
PGK1P00560 RPS14BYJL191W 417 nt11.01□□□□□ -0.65
Retrieved 100 of 7,029 protein–RNA pairs in 14.5 ms