Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.34■■□□□ 1.81
Trove2O08848 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
Trove2O08848 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC26.31■■□□□ 1.8
Trove2O08848 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC26.31■■□□□ 1.8
Trove2O08848 Zfp131-207ENSMUST00000224946 1783 ntBASIC26.3■■□□□ 1.8
Trove2O08848 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.3■■□□□ 1.8
Trove2O08848 Aes-201ENSMUST00000002518 1411 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
Trove2O08848 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trove2O08848 Galnt12-201ENSMUST00000045041 2288 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
Trove2O08848 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
Trove2O08848 Lactb-202ENSMUST00000215172 1806 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
Trove2O08848 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.25■■□□□ 1.79
Trove2O08848 Rtn2-201ENSMUST00000032559 1990 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
Trove2O08848 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC26.2■■□□□ 1.78
Trove2O08848 Dmwd-201ENSMUST00000032570 2494 ntAPPRIS P2 TSL 1 (best) BASIC26.17■■□□□ 1.78
Trove2O08848 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Trove2O08848 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
Trove2O08848 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.77
Trove2O08848 Gm6206-201ENSMUST00000133472 2199 ntBASIC26.13■■□□□ 1.77
Trove2O08848 Lrrc1-204ENSMUST00000183734 2113 ntTSL 1 (best) BASIC26.13■■□□□ 1.77
Trove2O08848 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Trove2O08848 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
Trove2O08848 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.11■■□□□ 1.77
Trove2O08848 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trove2O08848 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
Trove2O08848 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC26.1■■□□□ 1.77
Trove2O08848 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
Trove2O08848 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trove2O08848 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
Trove2O08848 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
Trove2O08848 Carnmt1-201ENSMUST00000025632 2090 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
Trove2O08848 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
Trove2O08848 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.76
Trove2O08848 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
Trove2O08848 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC26.01■■□□□ 1.75
Trove2O08848 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC25.99■■□□□ 1.75
Trove2O08848 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC25.99■■□□□ 1.75
Trove2O08848 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
Trove2O08848 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
Trove2O08848 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Trove2O08848 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC25.96■■□□□ 1.75
Trove2O08848 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC25.96■■□□□ 1.75
Trove2O08848 Casp9-202ENSMUST00000097805 1498 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
Trove2O08848 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.75
Trove2O08848 Mbd3-204ENSMUST00000105349 1566 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Trove2O08848 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Trove2O08848 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
Trove2O08848 AL845457.1-201ENSMUST00000197244 68 ntBASIC25.91■■□□□ 1.74
Trove2O08848 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Trove2O08848 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
Trove2O08848 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Trove2O08848 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Trove2O08848 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC25.9■■□□□ 1.74
Trove2O08848 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC25.88■■□□□ 1.73
Trove2O08848 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
Trove2O08848 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Trove2O08848 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
Trove2O08848 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Trove2O08848 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
Trove2O08848 Ino80b-201ENSMUST00000032109 1038 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trove2O08848 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trove2O08848 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC25.8■■□□□ 1.72
Trove2O08848 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC25.8■■□□□ 1.72
Trove2O08848 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
Trove2O08848 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trove2O08848 Hoxa13-203ENSMUST00000147595 2395 ntAPPRIS P5 TSL 5 BASIC25.78■■□□□ 1.72
Trove2O08848 Gm43445-201ENSMUST00000198564 2091 ntBASIC25.78■■□□□ 1.72
Trove2O08848 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Trove2O08848 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC25.77■■□□□ 1.72
Trove2O08848 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Trove2O08848 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Trove2O08848 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
Trove2O08848 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
Trove2O08848 Gm17082-201ENSMUST00000166043 1091 ntBASIC25.76■■□□□ 1.71
Trove2O08848 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC25.74■■□□□ 1.71
Trove2O08848 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Trove2O08848 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Trove2O08848 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
Trove2O08848 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC25.73■■□□□ 1.71
Trove2O08848 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC25.73■■□□□ 1.71
Trove2O08848 Grk2-210ENSMUST00000171123 1439 ntTSL 5 BASIC25.72■■□□□ 1.71
Trove2O08848 Ube2q2-202ENSMUST00000121677 1680 ntAPPRIS ALT2 TSL 5 BASIC25.72■■□□□ 1.71
Trove2O08848 Mapk14-205ENSMUST00000114758 1581 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
Trove2O08848 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC25.71■■□□□ 1.71
Trove2O08848 Gm27322-201ENSMUST00000184007 104 ntBASIC25.71■■□□□ 1.71
Trove2O08848 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC25.7■■□□□ 1.7
Trove2O08848 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
Trove2O08848 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trove2O08848 Shf-201ENSMUST00000048635 1431 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
Trove2O08848 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
Trove2O08848 Mipep-204ENSMUST00000225043 1548 ntBASIC25.67■■□□□ 1.7
Trove2O08848 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
Trove2O08848 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trove2O08848 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Trove2O08848 Slc25a28-201ENSMUST00000046038 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
Trove2O08848 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC25.64■■□□□ 1.7
Trove2O08848 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Trove2O08848 Smad7-202ENSMUST00000168918 1882 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.69
Trove2O08848 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC25.63■■□□□ 1.69
Trove2O08848 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
Retrieved 100 of 76,532 protein–RNA pairs in 54.3 ms