Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.39■■□□□ 1.17
Cpsf4lE9Q2N0 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Cpsf4lE9Q2N0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.37■■□□□ 1.17
Cpsf4lE9Q2N0 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Cpsf4lE9Q2N0 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
Cpsf4lE9Q2N0 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Cpsf4lE9Q2N0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
Cpsf4lE9Q2N0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Cpsf4lE9Q2N0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cpsf4lE9Q2N0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cpsf4lE9Q2N0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cpsf4lE9Q2N0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cpsf4lE9Q2N0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cpsf4lE9Q2N0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.24■■□□□ 1.15
Cpsf4lE9Q2N0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cpsf4lE9Q2N0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cpsf4lE9Q2N0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Cpsf4lE9Q2N0 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.22■■□□□ 1.15
Cpsf4lE9Q2N0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cpsf4lE9Q2N0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Cpsf4lE9Q2N0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cpsf4lE9Q2N0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cpsf4lE9Q2N0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cpsf4lE9Q2N0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cpsf4lE9Q2N0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cpsf4lE9Q2N0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cpsf4lE9Q2N0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
Cpsf4lE9Q2N0 Gm24804-201ENSMUST00000174982 85 ntBASIC22.12■■□□□ 1.13
Cpsf4lE9Q2N0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cpsf4lE9Q2N0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.1■■□□□ 1.13
Cpsf4lE9Q2N0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.1■■□□□ 1.13
Cpsf4lE9Q2N0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cpsf4lE9Q2N0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cpsf4lE9Q2N0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cpsf4lE9Q2N0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.08■■□□□ 1.13
Cpsf4lE9Q2N0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cpsf4lE9Q2N0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cpsf4lE9Q2N0 Peli2-204ENSMUST00000226513 1320 ntBASIC22.06■■□□□ 1.12
Cpsf4lE9Q2N0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cpsf4lE9Q2N0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cpsf4lE9Q2N0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cpsf4lE9Q2N0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cpsf4lE9Q2N0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cpsf4lE9Q2N0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
Cpsf4lE9Q2N0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22■■□□□ 1.11
Cpsf4lE9Q2N0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
Cpsf4lE9Q2N0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
Cpsf4lE9Q2N0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cpsf4lE9Q2N0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
Cpsf4lE9Q2N0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC21.98■■□□□ 1.11
Cpsf4lE9Q2N0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
Cpsf4lE9Q2N0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
Cpsf4lE9Q2N0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf4lE9Q2N0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC21.91■■□□□ 1.1
Cpsf4lE9Q2N0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cpsf4lE9Q2N0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC21.91■■□□□ 1.1
Cpsf4lE9Q2N0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf4lE9Q2N0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
Cpsf4lE9Q2N0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cpsf4lE9Q2N0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
Cpsf4lE9Q2N0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cpsf4lE9Q2N0 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cpsf4lE9Q2N0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC21.88■■□□□ 1.09
Cpsf4lE9Q2N0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
Cpsf4lE9Q2N0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
Cpsf4lE9Q2N0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC21.86■■□□□ 1.09
Cpsf4lE9Q2N0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf4lE9Q2N0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC21.85■■□□□ 1.09
Cpsf4lE9Q2N0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
Cpsf4lE9Q2N0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC21.84■■□□□ 1.09
Cpsf4lE9Q2N0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.09
Cpsf4lE9Q2N0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC21.82■■□□□ 1.08
Cpsf4lE9Q2N0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cpsf4lE9Q2N0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
Cpsf4lE9Q2N0 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
Cpsf4lE9Q2N0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Cpsf4lE9Q2N0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Cpsf4lE9Q2N0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC21.78■■□□□ 1.08
Cpsf4lE9Q2N0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
Cpsf4lE9Q2N0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC21.78■■□□□ 1.08
Cpsf4lE9Q2N0 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
Cpsf4lE9Q2N0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Cpsf4lE9Q2N0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Cpsf4lE9Q2N0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Cpsf4lE9Q2N0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Cpsf4lE9Q2N0 Gm16148-201ENSMUST00000119653 893 ntBASIC21.75■■□□□ 1.07
Cpsf4lE9Q2N0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cpsf4lE9Q2N0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Cpsf4lE9Q2N0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Cpsf4lE9Q2N0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Cpsf4lE9Q2N0 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC21.73■■□□□ 1.07
Cpsf4lE9Q2N0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC21.73■■□□□ 1.07
Cpsf4lE9Q2N0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC21.73■■□□□ 1.07
Cpsf4lE9Q2N0 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cpsf4lE9Q2N0 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Cpsf4lE9Q2N0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cpsf4lE9Q2N0 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Cpsf4lE9Q2N0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Cpsf4lE9Q2N0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC21.71■■□□□ 1.07
Cpsf4lE9Q2N0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 36.1 ms