Protein–RNA interactions for Protein: A0A140T8N6

Trbv13-2, T cell receptor beta, variable 13-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-2A0A140T8N6 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.16■□□□□ 0.5
Trbv13-2A0A140T8N6 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.16■□□□□ 0.5
Trbv13-2A0A140T8N6 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Trbv13-2A0A140T8N6 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Trbv13-2A0A140T8N6 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv13-2A0A140T8N6 Tcf15-201ENSMUST00000089112 980 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Trbv13-2A0A140T8N6 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv13-2A0A140T8N6 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv13-2A0A140T8N6 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Trbv13-2A0A140T8N6 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Trbv13-2A0A140T8N6 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv13-2A0A140T8N6 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.05■□□□□ 0.48
Trbv13-2A0A140T8N6 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv13-2A0A140T8N6 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Trbv13-2A0A140T8N6 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
Trbv13-2A0A140T8N6 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
Trbv13-2A0A140T8N6 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv13-2A0A140T8N6 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv13-2A0A140T8N6 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv13-2A0A140T8N6 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Trbv13-2A0A140T8N6 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
Trbv13-2A0A140T8N6 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
Trbv13-2A0A140T8N6 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv13-2A0A140T8N6 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv13-2A0A140T8N6 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv13-2A0A140T8N6 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Trbv13-2A0A140T8N6 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv13-2A0A140T8N6 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
Trbv13-2A0A140T8N6 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
Trbv13-2A0A140T8N6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
Trbv13-2A0A140T8N6 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC17.91■□□□□ 0.46
Trbv13-2A0A140T8N6 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Trbv13-2A0A140T8N6 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
Trbv13-2A0A140T8N6 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trbv13-2A0A140T8N6 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
Trbv13-2A0A140T8N6 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Trbv13-2A0A140T8N6 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
Trbv13-2A0A140T8N6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv13-2A0A140T8N6 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
Trbv13-2A0A140T8N6 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv13-2A0A140T8N6 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
Trbv13-2A0A140T8N6 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
Trbv13-2A0A140T8N6 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
Trbv13-2A0A140T8N6 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC17.84■□□□□ 0.45
Trbv13-2A0A140T8N6 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Trbv13-2A0A140T8N6 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC17.84■□□□□ 0.45
Trbv13-2A0A140T8N6 Gm24804-201ENSMUST00000174982 85 ntBASIC17.83■□□□□ 0.44
Trbv13-2A0A140T8N6 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Trbv13-2A0A140T8N6 Peli2-204ENSMUST00000226513 1320 ntBASIC17.81■□□□□ 0.44
Trbv13-2A0A140T8N6 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv13-2A0A140T8N6 Tmeff1-201ENSMUST00000030032 2461 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Trbv13-2A0A140T8N6 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Trbv13-2A0A140T8N6 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC17.79■□□□□ 0.44
Trbv13-2A0A140T8N6 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Trbv13-2A0A140T8N6 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv13-2A0A140T8N6 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Trbv13-2A0A140T8N6 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv13-2A0A140T8N6 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Trbv13-2A0A140T8N6 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Trbv13-2A0A140T8N6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Trbv13-2A0A140T8N6 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv13-2A0A140T8N6 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Trbv13-2A0A140T8N6 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv13-2A0A140T8N6 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Trbv13-2A0A140T8N6 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.42
Trbv13-2A0A140T8N6 Cnot6l-203ENSMUST00000122003 2089 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv13-2A0A140T8N6 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Trbv13-2A0A140T8N6 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.68■□□□□ 0.42
Trbv13-2A0A140T8N6 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC17.68■□□□□ 0.42
Trbv13-2A0A140T8N6 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Trbv13-2A0A140T8N6 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC17.67■□□□□ 0.42
Trbv13-2A0A140T8N6 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
Trbv13-2A0A140T8N6 AC153504.1-201ENSMUST00000218379 2290 ntBASIC17.67■□□□□ 0.42
Trbv13-2A0A140T8N6 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv13-2A0A140T8N6 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Trbv13-2A0A140T8N6 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Trbv13-2A0A140T8N6 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trbv13-2A0A140T8N6 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Trbv13-2A0A140T8N6 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Trbv13-2A0A140T8N6 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv13-2A0A140T8N6 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC17.64■□□□□ 0.41
Trbv13-2A0A140T8N6 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv13-2A0A140T8N6 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv13-2A0A140T8N6 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trbv13-2A0A140T8N6 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv13-2A0A140T8N6 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv13-2A0A140T8N6 Fam196a-201ENSMUST00000171394 2490 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trbv13-2A0A140T8N6 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC17.63■□□□□ 0.41
Trbv13-2A0A140T8N6 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trbv13-2A0A140T8N6 Noxo1-201ENSMUST00000019464 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trbv13-2A0A140T8N6 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trbv13-2A0A140T8N6 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC17.62■□□□□ 0.41
Trbv13-2A0A140T8N6 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Trbv13-2A0A140T8N6 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.61■□□□□ 0.41
Trbv13-2A0A140T8N6 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv13-2A0A140T8N6 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trbv13-2A0A140T8N6 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trbv13-2A0A140T8N6 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv13-2A0A140T8N6 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv13-2A0A140T8N6 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 15.5 ms