Protein–RNA interactions for Protein: A0A140T8N3

Igkv13-84, Immunoglobulin kappa chain variable 13-84 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv13-84A0A140T8N3 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Igkv13-84A0A140T8N3 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Igkv13-84A0A140T8N3 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC22.73■■□□□ 1.23
Igkv13-84A0A140T8N3 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC22.72■■□□□ 1.23
Igkv13-84A0A140T8N3 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
Igkv13-84A0A140T8N3 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC22.68■■□□□ 1.22
Igkv13-84A0A140T8N3 Gm2415-204ENSMUST00000190235 2004 ntBASIC22.68■■□□□ 1.22
Igkv13-84A0A140T8N3 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Igkv13-84A0A140T8N3 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
Igkv13-84A0A140T8N3 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Igkv13-84A0A140T8N3 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
Igkv13-84A0A140T8N3 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
Igkv13-84A0A140T8N3 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Igkv13-84A0A140T8N3 Gm24804-201ENSMUST00000174982 85 ntBASIC22.61■■□□□ 1.21
Igkv13-84A0A140T8N3 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Igkv13-84A0A140T8N3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
Igkv13-84A0A140T8N3 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Igkv13-84A0A140T8N3 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Igkv13-84A0A140T8N3 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC22.58■■□□□ 1.21
Igkv13-84A0A140T8N3 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
Igkv13-84A0A140T8N3 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC22.56■■□□□ 1.2
Igkv13-84A0A140T8N3 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.55■■□□□ 1.2
Igkv13-84A0A140T8N3 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC22.55■■□□□ 1.2
Igkv13-84A0A140T8N3 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Igkv13-84A0A140T8N3 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC22.53■■□□□ 1.2
Igkv13-84A0A140T8N3 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Igkv13-84A0A140T8N3 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Igkv13-84A0A140T8N3 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC22.51■■□□□ 1.19
Igkv13-84A0A140T8N3 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
Igkv13-84A0A140T8N3 Gm6658-202ENSMUST00000209493 1885 ntBASIC22.51■■□□□ 1.19
Igkv13-84A0A140T8N3 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Igkv13-84A0A140T8N3 Peli2-204ENSMUST00000226513 1320 ntBASIC22.5■■□□□ 1.19
Igkv13-84A0A140T8N3 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Igkv13-84A0A140T8N3 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
Igkv13-84A0A140T8N3 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC22.48■■□□□ 1.19
Igkv13-84A0A140T8N3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
Igkv13-84A0A140T8N3 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Igkv13-84A0A140T8N3 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
Igkv13-84A0A140T8N3 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC22.41■■□□□ 1.18
Igkv13-84A0A140T8N3 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC22.4■■□□□ 1.18
Igkv13-84A0A140T8N3 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Igkv13-84A0A140T8N3 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Igkv13-84A0A140T8N3 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.17
Igkv13-84A0A140T8N3 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Igkv13-84A0A140T8N3 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC22.37■■□□□ 1.17
Igkv13-84A0A140T8N3 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
Igkv13-84A0A140T8N3 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Igkv13-84A0A140T8N3 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC22.34■■□□□ 1.17
Igkv13-84A0A140T8N3 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC22.31■■□□□ 1.16
Igkv13-84A0A140T8N3 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Igkv13-84A0A140T8N3 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Igkv13-84A0A140T8N3 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Igkv13-84A0A140T8N3 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Igkv13-84A0A140T8N3 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Igkv13-84A0A140T8N3 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
Igkv13-84A0A140T8N3 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Igkv13-84A0A140T8N3 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC22.29■■□□□ 1.16
Igkv13-84A0A140T8N3 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Igkv13-84A0A140T8N3 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Igkv13-84A0A140T8N3 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Igkv13-84A0A140T8N3 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Igkv13-84A0A140T8N3 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Igkv13-84A0A140T8N3 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Igkv13-84A0A140T8N3 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
Igkv13-84A0A140T8N3 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC22.23■■□□□ 1.15
Igkv13-84A0A140T8N3 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Igkv13-84A0A140T8N3 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Igkv13-84A0A140T8N3 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Igkv13-84A0A140T8N3 Gm16148-201ENSMUST00000119653 893 ntBASIC22.2■■□□□ 1.14
Igkv13-84A0A140T8N3 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC22.2■■□□□ 1.14
Igkv13-84A0A140T8N3 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Igkv13-84A0A140T8N3 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC22.17■■□□□ 1.14
Igkv13-84A0A140T8N3 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Igkv13-84A0A140T8N3 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC22.17■■□□□ 1.14
Igkv13-84A0A140T8N3 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Igkv13-84A0A140T8N3 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Igkv13-84A0A140T8N3 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC22.15■■□□□ 1.14
Igkv13-84A0A140T8N3 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Igkv13-84A0A140T8N3 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Igkv13-84A0A140T8N3 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
Igkv13-84A0A140T8N3 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Igkv13-84A0A140T8N3 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC22.12■■□□□ 1.13
Igkv13-84A0A140T8N3 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Igkv13-84A0A140T8N3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Igkv13-84A0A140T8N3 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Igkv13-84A0A140T8N3 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC22.09■■□□□ 1.13
Igkv13-84A0A140T8N3 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Igkv13-84A0A140T8N3 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Igkv13-84A0A140T8N3 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Igkv13-84A0A140T8N3 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Igkv13-84A0A140T8N3 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC22.08■■□□□ 1.12
Igkv13-84A0A140T8N3 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Igkv13-84A0A140T8N3 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Igkv13-84A0A140T8N3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Igkv13-84A0A140T8N3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.06■■□□□ 1.12
Igkv13-84A0A140T8N3 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Igkv13-84A0A140T8N3 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Igkv13-84A0A140T8N3 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
Igkv13-84A0A140T8N3 Mtch1-201ENSMUST00000095427 1922 ntAPPRIS P3 TSL 1 (best) BASIC22.04■■□□□ 1.12
Igkv13-84A0A140T8N3 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 11 ms