Protein–RNA interactions for Protein: A0A0G2JES9

Igkv4-54, Immunoglobulin kappa chain variable 4-54 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv4-54A0A0G2JES9 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv4-54A0A0G2JES9 Raly-203ENSMUST00000109701 1709 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
Igkv4-54A0A0G2JES9 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv4-54A0A0G2JES9 Rbfox2-201ENSMUST00000048145 1720 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Igkv4-54A0A0G2JES9 Ppp2r2d-201ENSMUST00000041097 2081 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Igkv4-54A0A0G2JES9 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.53■□□□□ 0.56
Igkv4-54A0A0G2JES9 Fcho2-203ENSMUST00000109403 1523 ntTSL 5 BASIC18.53■□□□□ 0.56
Igkv4-54A0A0G2JES9 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Igkv4-54A0A0G2JES9 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Igkv4-54A0A0G2JES9 Popdc3-202ENSMUST00000161803 1369 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Igkv4-54A0A0G2JES9 Cenpv-201ENSMUST00000018653 1032 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Igkv4-54A0A0G2JES9 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.51■□□□□ 0.55
Igkv4-54A0A0G2JES9 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Igkv4-54A0A0G2JES9 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Igkv4-54A0A0G2JES9 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv4-54A0A0G2JES9 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Igkv4-54A0A0G2JES9 Gm24804-201ENSMUST00000174982 85 ntBASIC18.46■□□□□ 0.55
Igkv4-54A0A0G2JES9 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Igkv4-54A0A0G2JES9 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
Igkv4-54A0A0G2JES9 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.43■□□□□ 0.54
Igkv4-54A0A0G2JES9 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.43■□□□□ 0.54
Igkv4-54A0A0G2JES9 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.42■□□□□ 0.54
Igkv4-54A0A0G2JES9 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv4-54A0A0G2JES9 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Igkv4-54A0A0G2JES9 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Igkv4-54A0A0G2JES9 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
Igkv4-54A0A0G2JES9 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv4-54A0A0G2JES9 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Igkv4-54A0A0G2JES9 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Igkv4-54A0A0G2JES9 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv4-54A0A0G2JES9 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv4-54A0A0G2JES9 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Igkv4-54A0A0G2JES9 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv4-54A0A0G2JES9 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv4-54A0A0G2JES9 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Igkv4-54A0A0G2JES9 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Igkv4-54A0A0G2JES9 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Igkv4-54A0A0G2JES9 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Igkv4-54A0A0G2JES9 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.31■□□□□ 0.52
Igkv4-54A0A0G2JES9 Peli2-204ENSMUST00000226513 1320 ntBASIC18.3■□□□□ 0.52
Igkv4-54A0A0G2JES9 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.3■□□□□ 0.52
Igkv4-54A0A0G2JES9 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Igkv4-54A0A0G2JES9 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Igkv4-54A0A0G2JES9 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.29■□□□□ 0.52
Igkv4-54A0A0G2JES9 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv4-54A0A0G2JES9 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv4-54A0A0G2JES9 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Igkv4-54A0A0G2JES9 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Igkv4-54A0A0G2JES9 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv4-54A0A0G2JES9 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Igkv4-54A0A0G2JES9 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Igkv4-54A0A0G2JES9 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-54A0A0G2JES9 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-54A0A0G2JES9 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Igkv4-54A0A0G2JES9 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Igkv4-54A0A0G2JES9 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.25■□□□□ 0.51
Igkv4-54A0A0G2JES9 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Igkv4-54A0A0G2JES9 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.23■□□□□ 0.51
Igkv4-54A0A0G2JES9 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
Igkv4-54A0A0G2JES9 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Igkv4-54A0A0G2JES9 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv4-54A0A0G2JES9 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Igkv4-54A0A0G2JES9 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
Igkv4-54A0A0G2JES9 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Igkv4-54A0A0G2JES9 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
Igkv4-54A0A0G2JES9 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv4-54A0A0G2JES9 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Igkv4-54A0A0G2JES9 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.16■□□□□ 0.5
Igkv4-54A0A0G2JES9 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
Igkv4-54A0A0G2JES9 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igkv4-54A0A0G2JES9 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Igkv4-54A0A0G2JES9 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.5
Igkv4-54A0A0G2JES9 Gm16148-201ENSMUST00000119653 893 ntBASIC18.13■□□□□ 0.49
Igkv4-54A0A0G2JES9 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv4-54A0A0G2JES9 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Igkv4-54A0A0G2JES9 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Igkv4-54A0A0G2JES9 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Igkv4-54A0A0G2JES9 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv4-54A0A0G2JES9 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
Igkv4-54A0A0G2JES9 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Igkv4-54A0A0G2JES9 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Igkv4-54A0A0G2JES9 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv4-54A0A0G2JES9 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Igkv4-54A0A0G2JES9 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Igkv4-54A0A0G2JES9 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.06■□□□□ 0.48
Igkv4-54A0A0G2JES9 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv4-54A0A0G2JES9 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Igkv4-54A0A0G2JES9 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18.05■□□□□ 0.48
Igkv4-54A0A0G2JES9 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
Igkv4-54A0A0G2JES9 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Igkv4-54A0A0G2JES9 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv4-54A0A0G2JES9 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
Igkv4-54A0A0G2JES9 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv4-54A0A0G2JES9 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Igkv4-54A0A0G2JES9 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Igkv4-54A0A0G2JES9 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv4-54A0A0G2JES9 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv4-54A0A0G2JES9 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
Igkv4-54A0A0G2JES9 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC18.01■□□□□ 0.47
Igkv4-54A0A0G2JES9 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18■□□□□ 0.47
Retrieved 100 of 76,532 protein–RNA pairs in 14.3 ms