Protein–RNA interactions for Protein: A0A0A6YXE0

Ighv1-59, Immunoglobulin heavy variable V1-59 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-59A0A0A6YXE0 Rnf130-202ENSMUST00000102776 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Ighv1-59A0A0A6YXE0 Pwwp2a-202ENSMUST00000094294 1814 ntTSL 5 BASIC18.49■□□□□ 0.55
Ighv1-59A0A0A6YXE0 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-59A0A0A6YXE0 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Ighv1-59A0A0A6YXE0 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Ighv1-59A0A0A6YXE0 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC18.47■□□□□ 0.55
Ighv1-59A0A0A6YXE0 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Ighv1-59A0A0A6YXE0 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Ighv1-59A0A0A6YXE0 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
Ighv1-59A0A0A6YXE0 Sap30l-201ENSMUST00000020826 1151 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Ighv1-59A0A0A6YXE0 Snf8-202ENSMUST00000107700 849 ntTSL 2 BASIC18.41■□□□□ 0.54
Ighv1-59A0A0A6YXE0 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Ighv1-59A0A0A6YXE0 Gm2415-204ENSMUST00000190235 2004 ntBASIC18.4■□□□□ 0.54
Ighv1-59A0A0A6YXE0 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-59A0A0A6YXE0 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-59A0A0A6YXE0 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Ighv1-59A0A0A6YXE0 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Ighv1-59A0A0A6YXE0 Gm24804-201ENSMUST00000174982 85 ntBASIC18.36■□□□□ 0.53
Ighv1-59A0A0A6YXE0 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Ighv1-59A0A0A6YXE0 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
Ighv1-59A0A0A6YXE0 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-59A0A0A6YXE0 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ighv1-59A0A0A6YXE0 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-59A0A0A6YXE0 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC18.31■□□□□ 0.52
Ighv1-59A0A0A6YXE0 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ighv1-59A0A0A6YXE0 Gm6658-202ENSMUST00000209493 1885 ntBASIC18.31■□□□□ 0.52
Ighv1-59A0A0A6YXE0 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Ighv1-59A0A0A6YXE0 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
Ighv1-59A0A0A6YXE0 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Ighv1-59A0A0A6YXE0 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-59A0A0A6YXE0 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Ighv1-59A0A0A6YXE0 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Ighv1-59A0A0A6YXE0 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-59A0A0A6YXE0 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Ighv1-59A0A0A6YXE0 Peli2-204ENSMUST00000226513 1320 ntBASIC18.25■□□□□ 0.51
Ighv1-59A0A0A6YXE0 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-59A0A0A6YXE0 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Ighv1-59A0A0A6YXE0 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Ighv1-59A0A0A6YXE0 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
Ighv1-59A0A0A6YXE0 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC18.21■□□□□ 0.51
Ighv1-59A0A0A6YXE0 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Ighv1-59A0A0A6YXE0 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-59A0A0A6YXE0 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Ighv1-59A0A0A6YXE0 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC18.19■□□□□ 0.5
Ighv1-59A0A0A6YXE0 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-59A0A0A6YXE0 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Ighv1-59A0A0A6YXE0 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC18.17■□□□□ 0.5
Ighv1-59A0A0A6YXE0 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ighv1-59A0A0A6YXE0 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Ighv1-59A0A0A6YXE0 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-59A0A0A6YXE0 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Ighv1-59A0A0A6YXE0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC18.14■□□□□ 0.49
Ighv1-59A0A0A6YXE0 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Ighv1-59A0A0A6YXE0 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-59A0A0A6YXE0 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-59A0A0A6YXE0 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Ighv1-59A0A0A6YXE0 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ighv1-59A0A0A6YXE0 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ighv1-59A0A0A6YXE0 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-59A0A0A6YXE0 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC18.11■□□□□ 0.49
Ighv1-59A0A0A6YXE0 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ighv1-59A0A0A6YXE0 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ighv1-59A0A0A6YXE0 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ighv1-59A0A0A6YXE0 Gm16148-201ENSMUST00000119653 893 ntBASIC18.09■□□□□ 0.49
Ighv1-59A0A0A6YXE0 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv1-59A0A0A6YXE0 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Ighv1-59A0A0A6YXE0 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.48
Ighv1-59A0A0A6YXE0 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-59A0A0A6YXE0 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
Ighv1-59A0A0A6YXE0 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
Ighv1-59A0A0A6YXE0 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-59A0A0A6YXE0 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC18.05■□□□□ 0.48
Ighv1-59A0A0A6YXE0 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Ighv1-59A0A0A6YXE0 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Ighv1-59A0A0A6YXE0 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
Ighv1-59A0A0A6YXE0 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
Ighv1-59A0A0A6YXE0 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
Ighv1-59A0A0A6YXE0 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-59A0A0A6YXE0 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-59A0A0A6YXE0 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
Ighv1-59A0A0A6YXE0 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Ighv1-59A0A0A6YXE0 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC18.01■□□□□ 0.47
Ighv1-59A0A0A6YXE0 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC18■□□□□ 0.47
Ighv1-59A0A0A6YXE0 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
Ighv1-59A0A0A6YXE0 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-59A0A0A6YXE0 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC17.99■□□□□ 0.47
Ighv1-59A0A0A6YXE0 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-59A0A0A6YXE0 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Ighv1-59A0A0A6YXE0 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
Ighv1-59A0A0A6YXE0 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC17.98■□□□□ 0.47
Ighv1-59A0A0A6YXE0 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
Ighv1-59A0A0A6YXE0 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-59A0A0A6YXE0 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-59A0A0A6YXE0 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Ighv1-59A0A0A6YXE0 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-59A0A0A6YXE0 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-59A0A0A6YXE0 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Ighv1-59A0A0A6YXE0 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
Ighv1-59A0A0A6YXE0 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
Ighv1-59A0A0A6YXE0 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
Retrieved 100 of 76,532 protein–RNA pairs in 15.6 ms