Protein–RNA interactions for Protein: A0A075B626

Trav12n-2, T cell receptor alpha variable 12D-2, mousemouse

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12n-2A0A075B626 Rundc3a-201ENSMUST00000006750 2046 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
Trav12n-2A0A075B626 Mon2-207ENSMUST00000219203 1844 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Trav12n-2A0A075B626 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
Trav12n-2A0A075B626 Dapk3-209ENSMUST00000219850 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
Trav12n-2A0A075B626 Homer3-202ENSMUST00000087467 880 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
Trav12n-2A0A075B626 Ppp1cc-201ENSMUST00000086294 1442 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
Trav12n-2A0A075B626 Ssbp3-203ENSMUST00000097934 1742 ntAPPRIS ALT2 TSL 5 BASIC23.7■■□□□ 1.38
Trav12n-2A0A075B626 Gm24804-201ENSMUST00000174982 85 ntBASIC23.69■■□□□ 1.38
Trav12n-2A0A075B626 C330011M18Rik-201ENSMUST00000071067 1849 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
Trav12n-2A0A075B626 Gm42517-201ENSMUST00000197216 1850 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
Trav12n-2A0A075B626 Mkrn1-202ENSMUST00000051671 1511 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
Trav12n-2A0A075B626 Gm26859-201ENSMUST00000181743 1852 ntTSL 5 BASIC23.64■■□□□ 1.37
Trav12n-2A0A075B626 Gm2415-204ENSMUST00000190235 2004 ntBASIC23.63■■□□□ 1.37
Trav12n-2A0A075B626 Fxyd1-205ENSMUST00000205439 535 ntAPPRIS P1 TSL 5 BASIC23.62■■□□□ 1.37
Trav12n-2A0A075B626 Tmco6-201ENSMUST00000007046 1817 ntAPPRIS P1 TSL 1 (best) BASIC23.61■■□□□ 1.37
Trav12n-2A0A075B626 Crlf1-201ENSMUST00000008032 1644 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.36
Trav12n-2A0A075B626 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trav12n-2A0A075B626 Rab22a-202ENSMUST00000109110 849 ntTSL 5 BASIC23.57■■□□□ 1.36
Trav12n-2A0A075B626 Ndufaf6-201ENSMUST00000058183 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.57■■□□□ 1.36
Trav12n-2A0A075B626 Tmem59-201ENSMUST00000030361 1775 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Trav12n-2A0A075B626 Btf3-201ENSMUST00000022163 1091 ntTSL 1 (best) BASIC23.55■■□□□ 1.36
Trav12n-2A0A075B626 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Trav12n-2A0A075B626 Gltp-201ENSMUST00000012028 1762 ntAPPRIS P1 TSL 1 (best) BASIC23.54■■□□□ 1.36
Trav12n-2A0A075B626 Mapk13-201ENSMUST00000004986 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Trav12n-2A0A075B626 Syt7-201ENSMUST00000073899 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.52■■□□□ 1.36
Trav12n-2A0A075B626 Peli2-204ENSMUST00000226513 1320 ntBASIC23.52■■□□□ 1.36
Trav12n-2A0A075B626 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trav12n-2A0A075B626 Prelid3b-201ENSMUST00000016401 1553 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Trav12n-2A0A075B626 Ildr2-207ENSMUST00000195557 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trav12n-2A0A075B626 Tnfsf12-202ENSMUST00000181810 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Trav12n-2A0A075B626 Hspd1-201ENSMUST00000027123 2423 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Trav12n-2A0A075B626 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC23.49■■□□□ 1.35
Trav12n-2A0A075B626 Tnfsfm13-202ENSMUST00000174159 1470 ntAPPRIS ALT2 TSL 2 BASIC23.49■■□□□ 1.35
Trav12n-2A0A075B626 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC23.47■■□□□ 1.35
Trav12n-2A0A075B626 Mapk3-202ENSMUST00000057669 1800 ntAPPRIS P2 TSL 1 (best) BASIC23.47■■□□□ 1.35
Trav12n-2A0A075B626 Gm6658-202ENSMUST00000209493 1885 ntBASIC23.46■■□□□ 1.35
Trav12n-2A0A075B626 Gm26566-201ENSMUST00000181601 1038 ntAPPRIS P1 BASIC23.45■■□□□ 1.34
Trav12n-2A0A075B626 Dnttip1-202ENSMUST00000109326 476 ntTSL 1 (best) BASIC23.44■■□□□ 1.34
Trav12n-2A0A075B626 Nectin3-203ENSMUST00000096052 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC23.44■■□□□ 1.34
Trav12n-2A0A075B626 Srp9-202ENSMUST00000111018 823 ntTSL 1 (best) BASIC23.42■■□□□ 1.34
Trav12n-2A0A075B626 Kcnmb4os2-201ENSMUST00000080943 1571 ntTSL 5 BASIC23.42■■□□□ 1.34
Trav12n-2A0A075B626 Chrna5-202ENSMUST00000213960 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Trav12n-2A0A075B626 Ccm2-201ENSMUST00000000388 1858 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Trav12n-2A0A075B626 Yif1b-202ENSMUST00000108237 1086 ntTSL 5 BASIC23.4■■□□□ 1.34
Trav12n-2A0A075B626 Mkrn1-203ENSMUST00000114822 751 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Trav12n-2A0A075B626 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC23.39■■□□□ 1.34
Trav12n-2A0A075B626 Ccz1-201ENSMUST00000031621 1769 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Trav12n-2A0A075B626 AI837181-202ENSMUST00000159759 1515 ntAPPRIS P1 TSL 1 (best) BASIC23.35■■□□□ 1.33
Trav12n-2A0A075B626 Vstm2l-201ENSMUST00000109523 1363 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
Trav12n-2A0A075B626 Spata1-201ENSMUST00000029839 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trav12n-2A0A075B626 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
Trav12n-2A0A075B626 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
Trav12n-2A0A075B626 Hoxd8-201ENSMUST00000019749 2634 ntAPPRIS P3 TSL 1 (best) BASIC23.31■■□□□ 1.32
Trav12n-2A0A075B626 Tgfbr1-205ENSMUST00000126171 1829 ntTSL 5 BASIC23.31■■□□□ 1.32
Trav12n-2A0A075B626 Tspan3-201ENSMUST00000034876 1716 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Trav12n-2A0A075B626 Raly-204ENSMUST00000116389 1759 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
Trav12n-2A0A075B626 Gm5601-202ENSMUST00000207161 1437 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
Trav12n-2A0A075B626 Gm16148-201ENSMUST00000119653 893 ntBASIC23.27■■□□□ 1.32
Trav12n-2A0A075B626 Gkap1-201ENSMUST00000091579 1523 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Trav12n-2A0A075B626 Tpm1-216ENSMUST00000113707 1898 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Trav12n-2A0A075B626 Rab7-204ENSMUST00000113598 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Trav12n-2A0A075B626 Sh3glb2-203ENSMUST00000113620 1694 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
Trav12n-2A0A075B626 Raly-202ENSMUST00000058089 1747 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
Trav12n-2A0A075B626 Lmo2-201ENSMUST00000111139 1434 ntTSL 5 BASIC23.2■■□□□ 1.3
Trav12n-2A0A075B626 Trp53rkb-202ENSMUST00000065753 1375 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
Trav12n-2A0A075B626 Ubl4a-207ENSMUST00000178691 1038 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
Trav12n-2A0A075B626 Pfn2-202ENSMUST00000119344 1879 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Trav12n-2A0A075B626 Sept11-208ENSMUST00000202308 1792 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Trav12n-2A0A075B626 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC23.18■■□□□ 1.3
Trav12n-2A0A075B626 Rhobtb3-202ENSMUST00000109606 1676 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Trav12n-2A0A075B626 St3gal5-201ENSMUST00000069994 2258 ntAPPRIS P3 TSL 1 (best) BASIC23.17■■□□□ 1.3
Trav12n-2A0A075B626 Vsig8-202ENSMUST00000177086 1519 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
Trav12n-2A0A075B626 Orai1-201ENSMUST00000051016 1482 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Trav12n-2A0A075B626 Plpp2-201ENSMUST00000063879 1654 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trav12n-2A0A075B626 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Trav12n-2A0A075B626 Hnrnpd-202ENSMUST00000072750 1537 ntAPPRIS ALT2 TSL 3 BASIC23.14■■□□□ 1.3
Trav12n-2A0A075B626 Ube2f-202ENSMUST00000171112 1547 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trav12n-2A0A075B626 E330040D14Rik-201ENSMUST00000192299 1374 ntBASIC23.12■■□□□ 1.29
Trav12n-2A0A075B626 Tlx1-201ENSMUST00000026236 2065 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
Trav12n-2A0A075B626 Ranbp1-202ENSMUST00000115645 1085 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trav12n-2A0A075B626 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.11■■□□□ 1.29
Trav12n-2A0A075B626 Nrg3-202ENSMUST00000168810 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC23.1■■□□□ 1.29
Trav12n-2A0A075B626 Fbll1-201ENSMUST00000160726 1503 ntAPPRIS P1 BASIC23.1■■□□□ 1.29
Trav12n-2A0A075B626 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Trav12n-2A0A075B626 Paip1-203ENSMUST00000126957 1731 ntTSL 5 BASIC23.08■■□□□ 1.29
Trav12n-2A0A075B626 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trav12n-2A0A075B626 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
Trav12n-2A0A075B626 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Trav12n-2A0A075B626 Reep6-203ENSMUST00000105355 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC23.08■■□□□ 1.28
Trav12n-2A0A075B626 Reep6-204ENSMUST00000105357 2127 ntTSL 1 (best) BASIC23.08■■□□□ 1.28
Trav12n-2A0A075B626 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
Trav12n-2A0A075B626 Gm266-201ENSMUST00000010673 1215 ntAPPRIS P1 BASIC23.06■■□□□ 1.28
Trav12n-2A0A075B626 Gm42984-201ENSMUST00000195990 987 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trav12n-2A0A075B626 Phf10-201ENSMUST00000024657 1663 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
Trav12n-2A0A075B626 Ythdf1-202ENSMUST00000108876 2272 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
Trav12n-2A0A075B626 Fam136a-201ENSMUST00000071492 1643 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Trav12n-2A0A075B626 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC23.02■■□□□ 1.28
Trav12n-2A0A075B626 Fcnaos-201ENSMUST00000127642 1351 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
Trav12n-2A0A075B626 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Trav12n-2A0A075B626 Bok-205ENSMUST00000201863 883 ntAPPRIS P1 TSL 5 BASIC23■■□□□ 1.27
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms