Protein–RNA interactions for Protein: Q9UNL2

SSR3, Translocon-associated protein subunit gamma, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3Q9UNL2 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 ILDR1-201ENST00000273691 2659 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 PXK-210ENST00000479241 2817 ntTSL 2 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 AKAP13-202ENST00000394510 9128 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 GLI3-201ENST00000395925 8208 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 ZNF706-209ENST00000520347 3502 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 MIR574-201ENST00000385209 96 ntBASIC12.5□□□□□ -0.41
SSR3Q9UNL2 AC103592.1-201ENST00000394513 664 ntBASIC12.5□□□□□ -0.41
SSR3Q9UNL2 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 AC254562.1-201ENST00000417586 456 ntBASIC12.5□□□□□ -0.41
SSR3Q9UNL2 TSSK5P-201ENST00000423978 907 ntBASIC12.5□□□□□ -0.41
SSR3Q9UNL2 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 ESRRAP2-203ENST00000453309 822 ntTSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 AL132639.3-201ENST00000556537 530 ntTSL 4 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 AC133539.2-201ENST00000604757 467 ntBASIC12.5□□□□□ -0.41
SSR3Q9UNL2 AC008738.7-201ENST00000609744 511 ntBASIC12.5□□□□□ -0.41
SSR3Q9UNL2 HMBOX1-203ENST00000397358 4082 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 SLC25A3-217ENST00000552981 1351 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 CCT8L1P-201ENST00000465400 1674 ntBASIC12.5□□□□□ -0.41
SSR3Q9UNL2 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 PLCXD1-201ENST00000381657 5507 ntAPPRIS P2 TSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 FTO-214ENST00000636218 2227 ntTSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 GTF2IRD1P1-202ENST00000457166 2426 ntTSL 2 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 ZNF564-201ENST00000339282 2935 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 BNIP3L-201ENST00000380629 3610 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 ATP13A2-203ENST00000452699 3981 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 ABCC3-201ENST00000285238 5716 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 CACNA1F-203ENST00000376265 6070 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 RP1-207ENST00000637698 6177 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC12.5□□□□□ -0.41
SSR3Q9UNL2 ADIRF-AS1-203ENST00000609111 3822 ntTSL 2 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 RBM15-204ENST00000617047 3284 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 ARHGEF9-226ENST00000636392 1920 ntTSL 5 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 SARS-202ENST00000369923 1882 ntTSL 5 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 TGFBRAP1-203ENST00000595531 5595 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 KCNMA1-241ENST00000638606 3852 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 KCNMA1-279ENST00000640182 3852 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 SEPT9-203ENST00000427177 3821 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 CNN2P11-201ENST00000429351 262 ntBASIC12.49□□□□□ -0.41
SSR3Q9UNL2 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 AL136295.3-201ENST00000558325 850 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 AP001063.1-201ENST00000568332 529 ntBASIC12.49□□□□□ -0.41
SSR3Q9UNL2 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 NR3C1-204ENST00000394466 3245 ntAPPRIS ALT1 TSL 5 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 SPATS2-201ENST00000321898 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 RSPO2-201ENST00000276659 3111 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC12.49□□□□□ -0.41
SSR3Q9UNL2 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms