Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 MARVELD2-203ENST00000436532 1563 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 AL022313.4-201ENST00000562756 2046 ntBASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 MARVELD3-201ENST00000268485 2912 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 MKL1-203ENST00000402042 4343 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 PPA2-204ENST00000354147 667 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 PPA2-205ENST00000432483 859 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 AC012362.1-201ENST00000434906 739 ntBASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 LINC01806-201ENST00000436506 765 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 RPL18AP8-201ENST00000486071 528 ntBASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 SKA2-205ENST00000580541 689 ntTSL 3 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 RN7SL470P-201ENST00000583069 259 ntBASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 ADGRE3-204ENST00000595472 486 ntTSL 3 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 GMFG-209ENST00000600322 622 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 AC025262.2-201ENST00000623975 1056 ntBASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 AC009975.2-202ENST00000634539 854 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 CCDC197-205ENST00000636493 1279 ntAPPRIS P5 TSL 5 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 HLA-C-210ENST00000640219 976 ntBASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 TRIM46-202ENST00000368382 3127 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 HS1BP3-201ENST00000304031 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 ADGRG6-204ENST00000367609 6887 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 NBPF3-205ENST00000454000 2133 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 ADAMTSL4-203ENST00000369039 4319 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 GMEB1-202ENST00000361872 1894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 API5-208ENST00000531273 1868 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 HECTD2-201ENST00000298068 4802 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 FHL2-206ENST00000408995 1367 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 PER3-201ENST00000361923 6203 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 SMTN-223ENST00000619644 3227 ntTSL 2 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 ANK1-203ENST00000314214 1185 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 NSUN5P1-203ENST00000422386 972 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 AL139241.1-201ENST00000433374 1168 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 AC004869.1-201ENST00000440935 540 ntTSL 4 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 SRRM2-205ENST00000570971 1132 ntTSL 2 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 AP000322.3-201ENST00000608665 388 ntBASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 MIR6858-201ENST00000620733 67 ntBASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 OR2I1P-208ENST00000641137 4948 ntBASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
NPIPA1Q9UND3 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms