Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 OR2V2-201ENST00000328275 948 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 XPNPEP2-201ENST00000371105 912 ntTSL 2 BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 CACNG7-202ENST00000391766 631 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 OR10N1P-201ENST00000392758 869 ntBASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 HLA-DPA2-205ENST00000433582 733 ntBASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 AGPAT5P1-201ENST00000455855 1019 ntBASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 MTHFD2P7-201ENST00000483867 983 ntBASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 RPL29P2-202ENST00000498671 657 ntBASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 NDUFB2P1-201ENST00000506966 295 ntBASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 SHBG-210ENST00000572262 984 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 LINC01996-201ENST00000573270 1273 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 FGF12-207ENST00000454309 3058 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SYNPO2Q9UMS6 PHF10-206ENST00000621772 1651 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 AC026748.1-201ENST00000624349 3251 ntBASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 NME1-209ENST00000511355 1645 ntTSL 5 BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 SEC16A-202ENST00000290037 8982 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 CYB5R2-201ENST00000299498 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 HIST1H2BJ-201ENST00000339812 381 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 CLCC1-202ENST00000348264 1124 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 DPPA5-201ENST00000370370 679 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 SPATA21-202ENST00000375577 1136 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 TMEM14B-201ENST00000379530 787 ntTSL 2 BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 SNORA50D-201ENST00000408059 134 ntBASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 IFNWP2-201ENST00000431203 580 ntBASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 RN7SL288P-201ENST00000490496 291 ntBASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 AC112250.1-201ENST00000504640 745 ntBASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 GDNF-207ENST00000515058 764 ntTSL 5 BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 BANF1-205ENST00000527348 670 ntAPPRIS P1 TSL 3 BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 ATP2A1-AS1-201ENST00000561547 558 ntTSL 2 BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 RN7SL605P-201ENST00000577229 281 ntBASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 RN7SL596P-201ENST00000582123 288 ntBASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 SNORA50D-202ENST00000627561 132 ntBASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 ATP5J2-PTCD1-201ENST00000413834 2491 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 AL928921.2-201ENST00000641325 2442 ntBASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 HNF1B-204ENST00000617811 2977 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 LDB3-204ENST00000372066 1598 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SYNPO2Q9UMS6 CA6-205ENST00000480186 1493 ntTSL 2 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 ACTN1-205ENST00000538545 2813 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 BCAR1-205ENST00000420641 2725 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 SLC7A9-201ENST00000023064 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 LCN6-201ENST00000341206 717 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 CTNNBIP1-201ENST00000377256 451 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 C20orf141-201ENST00000380589 730 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 ACOT6-201ENST00000381139 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 MPV17-209ENST00000405983 859 ntTSL 5 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 PHBP10-201ENST00000416467 784 ntBASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 NAA60-205ENST00000424546 1149 ntTSL 2 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 PLSCR1-202ENST00000448787 996 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 PRR34-AS1-203ENST00000451166 877 ntTSL 3 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 AC145422.1-201ENST00000541574 544 ntTSL 3 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 SLC25A21-203ENST00000555449 1023 ntAPPRIS ALT1 TSL 2 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 AC023968.2-201ENST00000560593 1049 ntBASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 MCEMP1-202ENST00000597445 763 ntAPPRIS ALT2 TSL 3 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 GMFG-206ENST00000597595 758 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC15.78■□□□□ 0.12
SYNPO2Q9UMS6 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42.9 ms