Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 DDX54-202ENST00000314045 4380 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 LINC01749-202ENST00000607802 3408 ntTSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 NPPC-201ENST00000295440 500 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 USB1-202ENST00000423271 1217 ntTSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC10.68□□□□□ -0.7
VGLL1Q99990 TTTY23B-201ENST00000442790 549 ntBASIC10.68□□□□□ -0.7
VGLL1Q99990 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC10.68□□□□□ -0.7
VGLL1Q99990 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC10.68□□□□□ -0.7
VGLL1Q99990 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC10.68□□□□□ -0.7
VGLL1Q99990 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 PFN2-215ENST00000497148 743 ntTSL 4 BASIC10.68□□□□□ -0.7
VGLL1Q99990 AC095060.1-201ENST00000502455 549 ntTSL 4 BASIC10.68□□□□□ -0.7
VGLL1Q99990 FUZ-207ENST00000526575 482 ntTSL 4 BASIC10.68□□□□□ -0.7
VGLL1Q99990 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC10.68□□□□□ -0.7
VGLL1Q99990 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
VGLL1Q99990 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 AC090386.2-201ENST00000623010 1039 ntBASIC10.68□□□□□ -0.7
VGLL1Q99990 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC10.68□□□□□ -0.7
VGLL1Q99990 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 DENND4C-205ENST00000434457 6718 ntTSL 5 BASIC10.68□□□□□ -0.7
VGLL1Q99990 GPRASP1-202ENST00000415986 5877 ntAPPRIS P1 TSL 4 BASIC10.68□□□□□ -0.7
VGLL1Q99990 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 SPTBN2-210ENST00000611817 2890 ntTSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC10.68□□□□□ -0.7
VGLL1Q99990 CAD-201ENST00000264705 7265 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 WHRN-201ENST00000265134 2847 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC10.68□□□□□ -0.7
VGLL1Q99990 KCNMA1-210ENST00000404771 4014 ntAPPRIS ALT2 TSL 5 BASIC10.68□□□□□ -0.7
VGLL1Q99990 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 AC127496.1-201ENST00000576234 3133 ntTSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 PPP1R8-202ENST00000311772 2344 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 NPTN-IT1-201ENST00000628401 2283 ntBASIC10.68□□□□□ -0.7
VGLL1Q99990 LGALS9-201ENST00000302228 3018 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 GOLGA8IP-201ENST00000340249 1899 ntTSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 CYP2J2-201ENST00000371204 1896 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 ADCY4-202ENST00000418030 3353 ntAPPRIS P1 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 AC012435.1-201ENST00000563287 3385 ntTSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 MDM1-201ENST00000303145 2918 ntAPPRIS P3 TSL 1 (best) BASIC10.68□□□□□ -0.7
VGLL1Q99990 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC10.68□□□□□ -0.7
VGLL1Q99990 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC10.67□□□□□ -0.7
VGLL1Q99990 CLIC4-201ENST00000374379 4346 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 LINC00869-206ENST00000610578 5734 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC10.67□□□□□ -0.7
VGLL1Q99990 WDR81-205ENST00000437219 3184 ntTSL 2 BASIC10.67□□□□□ -0.7
VGLL1Q99990 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 SPG11-203ENST00000535302 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC10.67□□□□□ -0.7
VGLL1Q99990 POLD1-210ENST00000599857 3435 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 C15orf39-202ENST00000394987 4430 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 EOGT-202ENST00000383701 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC10.67□□□□□ -0.7
VGLL1Q99990 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC10.67□□□□□ -0.7
VGLL1Q99990 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
VGLL1Q99990 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
VGLL1Q99990 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
VGLL1Q99990 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC10.67□□□□□ -0.7
VGLL1Q99990 RFPL4A-201ENST00000434937 1035 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
VGLL1Q99990 CNN2P10-201ENST00000443067 918 ntBASIC10.67□□□□□ -0.7
VGLL1Q99990 KLF2P1-201ENST00000447438 1042 ntBASIC10.67□□□□□ -0.7
VGLL1Q99990 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
VGLL1Q99990 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC10.67□□□□□ -0.7
VGLL1Q99990 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC10.67□□□□□ -0.7
VGLL1Q99990 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
VGLL1Q99990 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC10.67□□□□□ -0.7
VGLL1Q99990 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 AP006547.1-201ENST00000563435 692 ntBASIC10.67□□□□□ -0.7
VGLL1Q99990 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
VGLL1Q99990 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC10.67□□□□□ -0.7
VGLL1Q99990 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC10.67□□□□□ -0.7
VGLL1Q99990 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC10.67□□□□□ -0.7
VGLL1Q99990 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC10.67□□□□□ -0.7
VGLL1Q99990 AC025048.6-201ENST00000634326 1161 ntBASIC10.67□□□□□ -0.7
VGLL1Q99990 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 ARHGEF4-217ENST00000611048 3486 ntTSL 5 BASIC10.67□□□□□ -0.7
VGLL1Q99990 LINC00638-201ENST00000555578 2518 ntBASIC10.67□□□□□ -0.7
VGLL1Q99990 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
VGLL1Q99990 RAB11FIP1-202ENST00000330843 7811 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms