Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 KRBOX4-202ENST00000344302 2774 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 FUK-202ENST00000378912 3925 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 PRRT2-202ENST00000358758 2567 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 SNAPC2-206ENST00000597584 1413 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 CPA5-206ENST00000474905 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 PHF2-203ENST00000610682 2921 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 AC073210.1-201ENST00000414799 232 ntBASIC15.53■□□□□ 0.08
TRIM50Q86XT4 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 BCAS2P2-201ENST00000425064 674 ntBASIC15.53■□□□□ 0.08
TRIM50Q86XT4 AQP7P5-201ENST00000428759 1049 ntBASIC15.53■□□□□ 0.08
TRIM50Q86XT4 AC005722.1-201ENST00000431878 964 ntBASIC15.53■□□□□ 0.08
TRIM50Q86XT4 AC114763.1-201ENST00000431985 928 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 LINC02557-201ENST00000432249 477 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 AQP7P4-201ENST00000447083 1042 ntBASIC15.53■□□□□ 0.08
TRIM50Q86XT4 AQP7P2-201ENST00000453967 1041 ntBASIC15.53■□□□□ 0.08
TRIM50Q86XT4 YPEL4-209ENST00000534711 889 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 MT2A-202ENST00000561491 581 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 AC008972.2-201ENST00000606587 494 ntBASIC15.53■□□□□ 0.08
TRIM50Q86XT4 AQP7P3-201ENST00000624547 1041 ntBASIC15.53■□□□□ 0.08
TRIM50Q86XT4 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 SPHK2-210ENST00000599748 2683 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 AC023908.3-201ENST00000564211 3047 ntBASIC15.53■□□□□ 0.08
TRIM50Q86XT4 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 SLC4A9-203ENST00000506545 2838 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
TRIM50Q86XT4 AL365181.3-201ENST00000605886 3222 ntBASIC15.53■□□□□ 0.08
TRIM50Q86XT4 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 CDCA7-203ENST00000410019 1488 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 SRC-202ENST00000373558 4304 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 SVOPL-203ENST00000421622 1653 ntTSL 5 BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 DERL3-202ENST00000318109 860 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 KRT18P62-201ENST00000446618 1287 ntBASIC15.52■□□□□ 0.08
TRIM50Q86XT4 Metazoa_SRP.100-201ENST00000447610 282 ntBASIC15.52■□□□□ 0.08
TRIM50Q86XT4 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 FAM3D-AS1-201ENST00000464125 821 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 AC024293.1-201ENST00000467930 498 ntBASIC15.52■□□□□ 0.08
TRIM50Q86XT4 COQ10BP2-201ENST00000513804 724 ntBASIC15.52■□□□□ 0.08
TRIM50Q86XT4 AC003982.2-201ENST00000536933 365 ntTSL 3 BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 TTC23L-209ENST00000638320 1185 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 AC002472.4-201ENST00000641915 272 ntBASIC15.52■□□□□ 0.08
TRIM50Q86XT4 EBLN3P-202ENST00000625445 4520 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
TRIM50Q86XT4 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM50Q86XT4 AC008620.2-201ENST00000510294 1569 ntBASIC15.52■□□□□ 0.07
TRIM50Q86XT4 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRIM50Q86XT4 AC007191.1-201ENST00000623179 2995 ntBASIC15.52■□□□□ 0.07
TRIM50Q86XT4 ARHGEF26-202ENST00000465093 3929 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM50Q86XT4 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM50Q86XT4 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM50Q86XT4 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC15.52■□□□□ 0.07
TRIM50Q86XT4 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
TRIM50Q86XT4 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM50Q86XT4 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC15.52■□□□□ 0.07
TRIM50Q86XT4 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM50Q86XT4 AC079781.5-202ENST00000641784 3743 ntBASIC15.52■□□□□ 0.07
TRIM50Q86XT4 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRIM50Q86XT4 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
TRIM50Q86XT4 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
TRIM50Q86XT4 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 FGFR1-201ENST00000326324 3816 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 CRISP2-201ENST00000339139 1382 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 CCL18-201ENST00000616054 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 UBE3A-204ENST00000438097 8939 ntAPPRIS P3 TSL 5 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 AC027601.5-201ENST00000624065 2482 ntBASIC15.51■□□□□ 0.07
TRIM50Q86XT4 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
TRIM50Q86XT4 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC15.51■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms