Protein–RNA interactions for Protein: Q495D7

LINC01559, Putative uncharacterized protein encoded by LINC01559, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01559Q495D7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 RARRES2P5-201ENST00000564013 466 ntBASIC10.92□□□□□ -0.66
LINC01559Q495D7 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 AC020636.2-201ENST00000569170 1189 ntAPPRIS P5 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 SMIM7-214ENST00000597711 1075 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 AC011462.2-201ENST00000598887 344 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 AC015802.5-201ENST00000607478 399 ntBASIC10.92□□□□□ -0.66
LINC01559Q495D7 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 PIBF1-207ENST00000615625 1098 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 AC007431.3-201ENST00000623221 587 ntBASIC10.92□□□□□ -0.66
LINC01559Q495D7 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 AC022400.7-201ENST00000625041 1236 ntBASIC10.92□□□□□ -0.66
LINC01559Q495D7 CASC19-222ENST00000641321 1173 ntBASIC10.92□□□□□ -0.66
LINC01559Q495D7 ZMYM3-207ENST00000373998 6067 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 SDHAF2-201ENST00000301761 2033 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 ASAP1-201ENST00000357668 6344 ntAPPRIS ALT2 TSL 5 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 AC012361.1-201ENST00000447260 1498 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 CAMK2D-208ENST00000508738 1470 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 ALPK3-201ENST00000258888 10917 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 KIF3A-201ENST00000378735 3266 ntAPPRIS ALT1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 IGF2-203ENST00000381395 4527 ntAPPRIS P2 TSL 2 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 CDT1-201ENST00000301019 3240 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01559Q495D7 AC244636.2-201ENST00000448031 1669 ntBASIC10.92□□□□□ -0.66
LINC01559Q495D7 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 IKBKG-208ENST00000611176 1654 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 LINC00538-201ENST00000626109 1906 ntBASIC10.92□□□□□ -0.66
LINC01559Q495D7 LINC01114-203ENST00000425879 2434 ntTSL 2 BASIC10.92□□□□□ -0.66
LINC01559Q495D7 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 NR4A2-209ENST00000426264 2642 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 HELLS-202ENST00000348459 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 KIAA1217-209ENST00000430453 5962 ntAPPRIS ALT2 TSL 5 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 KIAA1217-211ENST00000458595 5977 ntAPPRIS ALT2 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 COL6A4P2-202ENST00000504443 2753 ntBASIC10.91□□□□□ -0.66
LINC01559Q495D7 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 NISCH-207ENST00000479054 5173 ntAPPRIS P3 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 FBN3-201ENST00000270509 9232 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 TMPRSS2-201ENST00000332149 3205 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 TP73-201ENST00000346387 4854 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 NUTM2HP-201ENST00000442076 2498 ntBASIC10.91□□□□□ -0.66
LINC01559Q495D7 ZNF609-202ENST00000416172 3863 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 GABRR3-203ENST00000621172 1521 ntAPPRIS P1 TSL 5 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 AC007663.2-201ENST00000506039 2228 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 APOBEC2-201ENST00000244669 1151 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 TEX30-203ENST00000376022 828 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 APTX-203ENST00000379813 1121 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 USP32P3-201ENST00000413270 1174 ntBASIC10.91□□□□□ -0.66
LINC01559Q495D7 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 LINC01291-202ENST00000418204 441 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 AL445072.1-201ENST00000438994 639 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
LINC01559Q495D7 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 CREM-237ENST00000488328 1049 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 AC021192.1-201ENST00000510169 791 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 AC090095.1-201ENST00000519275 871 ntBASIC10.91□□□□□ -0.66
LINC01559Q495D7 NEDD8-203ENST00000524927 653 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 FTH1-202ENST00000526640 786 ntTSL 2 BASIC10.91□□□□□ -0.66
LINC01559Q495D7 AC068339.2-201ENST00000534395 618 ntBASIC10.91□□□□□ -0.66
LINC01559Q495D7 PPFIBP1-204ENST00000535047 875 ntTSL 1 (best) BASIC10.91□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms