Protein–RNA interactions for Protein: Q2I0M5

RSPO4, R-spondin-4, humanhuman

Predicted RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO4Q2I0M5 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 BCKDHA-202ENST00000457836 1745 ntTSL 2 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 NME1-209ENST00000511355 1645 ntTSL 5 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 KRT8P38-201ENST00000441370 1430 ntBASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC13.39□□□□□ -0.27
RSPO4Q2I0M5 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 AC067930.6-201ENST00000623257 4947 ntBASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 NIPAL3-203ENST00000358028 1757 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 SNRPN-205ENST00000400100 1751 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 HPSE2-206ENST00000628193 1760 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 ZMAT5-201ENST00000344318 899 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 MIR1307-201ENST00000408840 149 ntBASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 AC069257.3-201ENST00000431391 708 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 AC006059.1-201ENST00000438017 722 ntTSL 5 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 RN7SL487P-201ENST00000468140 344 ntBASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 YBX1P3-201ENST00000468366 909 ntBASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 RANBP6-202ENST00000485372 1000 ntTSL 2 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 COQ10BP2-201ENST00000513804 724 ntBASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 RPL10P8-201ENST00000522888 313 ntBASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 AC112694.1-202ENST00000540985 943 ntBASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 KRT127P-201ENST00000547183 433 ntBASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 AL139099.3-201ENST00000556657 401 ntTSL 3 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 AC018845.3-201ENST00000562536 516 ntTSL 3 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 AC142381.4-201ENST00000566806 702 ntTSL 3 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 AC142086.5-201ENST00000567619 702 ntTSL 5 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 AKR1B10P2-201ENST00000577332 927 ntBASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 SEPT4-AS1-203ENST00000580769 1000 ntTSL 3 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 AC136475.7-201ENST00000602949 592 ntBASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 BX510359.7-201ENST00000619819 630 ntBASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 AC008993.3-201ENST00000633603 631 ntTSL 5 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 ERAS-202ENST00000636362 826 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 ACE3P-201ENST00000423435 1973 ntBASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 NRG1-211ENST00000520502 1330 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
RSPO4Q2I0M5 Z98885.3-201ENST00000624882 1757 ntBASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 AC063926.3-201ENST00000624734 5658 ntBASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 ALDH1B1-201ENST00000377698 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 RB1CC1-201ENST00000025008 6635 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 EDF1-201ENST00000224073 640 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 RPS6-201ENST00000315377 863 ntTSL 3 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 KLK8-203ENST00000347619 555 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 AC245128.1-201ENST00000400864 1294 ntTSL 5 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 AP000959.1-201ENST00000441759 977 ntTSL 3 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 TMCO1-203ENST00000464650 1100 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 RN7SL340P-201ENST00000470792 296 ntBASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 ROPN1L-AS1-201ENST00000513037 189 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 SRPK2P-201ENST00000523408 1100 ntBASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 AC126177.4-201ENST00000547452 731 ntTSL 5 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 FOS-205ENST00000555242 629 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 AC027682.3-201ENST00000564717 207 ntTSL 5 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 ATF7-212ENST00000591397 860 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 AC010319.4-201ENST00000593957 691 ntTSL 3 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 AC022167.5-201ENST00000636296 1250 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 RDX-218ENST00000544551 4117 ntTSL 2 BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
RSPO4Q2I0M5 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 62.8 ms