Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 POTEM-201ENST00000547889 1817 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 XPNPEP1-201ENST00000322238 2467 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 TBC1D27-202ENST00000424239 1573 ntBASIC13.3□□□□□ -0.28
SKP1P63208 CUL2-210ENST00000626172 4115 ntTSL 5 BASIC13.3□□□□□ -0.28
SKP1P63208 BAG2-201ENST00000370693 6651 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 TPM1-202ENST00000288398 1295 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC13.3□□□□□ -0.28
SKP1P63208 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC13.3□□□□□ -0.28
SKP1P63208 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
SKP1P63208 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 ERP29P1-201ENST00000442902 706 ntBASIC13.3□□□□□ -0.28
SKP1P63208 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC13.3□□□□□ -0.28
SKP1P63208 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC13.3□□□□□ -0.28
SKP1P63208 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC13.3□□□□□ -0.28
SKP1P63208 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC13.3□□□□□ -0.28
SKP1P63208 CD164-210ENST00000512821 964 ntTSL 2 BASIC13.3□□□□□ -0.28
SKP1P63208 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC13.3□□□□□ -0.28
SKP1P63208 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC13.3□□□□□ -0.28
SKP1P63208 AL031713.1-201ENST00000564813 661 ntBASIC13.3□□□□□ -0.28
SKP1P63208 FAM104A-206ENST00000583024 417 ntTSL 3 BASIC13.3□□□□□ -0.28
SKP1P63208 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC13.3□□□□□ -0.28
SKP1P63208 AC005632.3-201ENST00000605544 308 ntBASIC13.3□□□□□ -0.28
SKP1P63208 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SKP1P63208 AC068587.10-201ENST00000641210 219 ntBASIC13.3□□□□□ -0.28
SKP1P63208 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 ABAT-213ENST00000567812 1959 ntTSL 2 BASIC13.3□□□□□ -0.28
SKP1P63208 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC13.3□□□□□ -0.28
SKP1P63208 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 TDRD9-202ENST00000409874 4782 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
SKP1P63208 TP73-211ENST00000604074 4806 ntTSL 5 BASIC13.3□□□□□ -0.28
SKP1P63208 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
SKP1P63208 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
SKP1P63208 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC13.3□□□□□ -0.28
SKP1P63208 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 AC006372.4-201ENST00000624122 1543 ntBASIC13.29□□□□□ -0.28
SKP1P63208 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 GATAD2A-203ENST00000404158 5776 ntAPPRIS ALT1 TSL 2 BASIC13.29□□□□□ -0.28
SKP1P63208 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SKP1P63208 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.29□□□□□ -0.28
SKP1P63208 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC13.29□□□□□ -0.28
SKP1P63208 MTA3-202ENST00000405592 5832 ntTSL 2 BASIC13.29□□□□□ -0.28
SKP1P63208 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC13.29□□□□□ -0.28
SKP1P63208 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC13.29□□□□□ -0.28
SKP1P63208 PSMA1-202ENST00000418988 1266 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 GS1-124K5.4-201ENST00000445681 540 ntTSL 2 BASIC13.29□□□□□ -0.28
SKP1P63208 EEF1DP6-201ENST00000449232 372 ntBASIC13.29□□□□□ -0.28
SKP1P63208 GRPEL2P1-201ENST00000453145 339 ntBASIC13.29□□□□□ -0.28
SKP1P63208 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SKP1P63208 PCMTD1-207ENST00000522514 1287 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SKP1P63208 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC13.29□□□□□ -0.28
SKP1P63208 AC025154.2-202ENST00000552379 592 ntTSL 3 BASIC13.29□□□□□ -0.28
SKP1P63208 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC13.29□□□□□ -0.28
SKP1P63208 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
SKP1P63208 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC13.29□□□□□ -0.28
SKP1P63208 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC13.29□□□□□ -0.28
SKP1P63208 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SKP1P63208 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.29□□□□□ -0.28
SKP1P63208 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
SKP1P63208 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.29□□□□□ -0.28
SKP1P63208 NEK4-201ENST00000233027 6057 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 YIPF6-201ENST00000374622 6134 ntTSL 2 BASIC13.29□□□□□ -0.28
SKP1P63208 AC245100.1-201ENST00000452996 1331 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 CACNA1G-207ENST00000429973 7120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 CACNA1G-217ENST00000507336 7116 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 SYK-203ENST00000375751 4936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 SERPINE3-204ENST00000524365 2293 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
SKP1P63208 BCL2L13-206ENST00000399782 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 TNFRSF1B-201ENST00000376259 3683 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 CACNA1G-214ENST00000505165 6633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 KRT8P18-201ENST00000413425 1445 ntBASIC13.29□□□□□ -0.28
SKP1P63208 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
SKP1P63208 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 MYO16-205ENST00000457511 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 RSPH9-201ENST00000372163 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
SKP1P63208 HLA-DQB1-202ENST00000399079 1501 ntBASIC13.29□□□□□ -0.28
SKP1P63208 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms