Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC12.54□□□□□ -0.4
VBP1P61758 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC12.54□□□□□ -0.4
VBP1P61758 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC12.54□□□□□ -0.4
VBP1P61758 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC12.54□□□□□ -0.4
VBP1P61758 ARL16-209ENST00000573715 763 ntTSL 3 BASIC12.54□□□□□ -0.4
VBP1P61758 ARL16-211ENST00000576135 694 ntTSL 3 BASIC12.54□□□□□ -0.4
VBP1P61758 IFT20-206ENST00000578122 834 ntTSL 2 BASIC12.54□□□□□ -0.4
VBP1P61758 IFT20-208ENST00000578985 831 ntTSL 3 BASIC12.54□□□□□ -0.4
VBP1P61758 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC12.54□□□□□ -0.4
VBP1P61758 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC12.54□□□□□ -0.4
VBP1P61758 ZNF331-201ENST00000253144 5042 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 OVOL1-201ENST00000335987 3034 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 PPP1R26P1-201ENST00000474415 3613 ntBASIC12.54□□□□□ -0.4
VBP1P61758 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 ATP1A1-201ENST00000295598 3654 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 AC087499.5-201ENST00000452760 1342 ntBASIC12.54□□□□□ -0.4
VBP1P61758 FMO6P-201ENST00000236166 1620 ntBASIC12.54□□□□□ -0.4
VBP1P61758 SLX4-201ENST00000294008 7307 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
VBP1P61758 NR3C2-203ENST00000358102 5893 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 HDAC7-202ENST00000354334 4065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 HDAC7-201ENST00000080059 4095 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 SETD1B-204ENST00000619791 5901 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 FAM225A-202ENST00000453010 5625 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 ARHGEF10L-202ENST00000361221 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 PHC2-201ENST00000257118 3870 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 CICP2-201ENST00000420675 2328 ntBASIC12.54□□□□□ -0.4
VBP1P61758 USP33-203ENST00000370793 4502 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
VBP1P61758 HDLBP-214ENST00000427183 6238 ntTSL 2 BASIC12.53□□□□□ -0.4
VBP1P61758 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 NMRAL2P-204ENST00000423298 1792 ntTSL 5 BASIC12.53□□□□□ -0.4
VBP1P61758 MLX-203ENST00000435881 2428 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC12.53□□□□□ -0.4
VBP1P61758 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 CC2D1A-208ENST00000589606 3117 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 CACNA2D2-206ENST00000479441 3453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 RHOH-222ENST00000617441 1872 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
VBP1P61758 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC12.53□□□□□ -0.4
VBP1P61758 RBMY1E-203ENST00000382659 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 RBMY1D-202ENST00000382680 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 RBMY1A1-203ENST00000382707 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 RBMY1B-202ENST00000383020 1921 ntAPPRIS P5 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 GRM4-206ENST00000544773 2983 ntTSL 2 BASIC12.53□□□□□ -0.4
VBP1P61758 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC12.53□□□□□ -0.4
VBP1P61758 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC12.53□□□□□ -0.4
VBP1P61758 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC12.53□□□□□ -0.4
VBP1P61758 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 ACTBP8-201ENST00000403258 1108 ntBASIC12.53□□□□□ -0.4
VBP1P61758 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC12.53□□□□□ -0.4
VBP1P61758 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC12.53□□□□□ -0.4
VBP1P61758 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 RN7SL399P-201ENST00000471648 279 ntBASIC12.53□□□□□ -0.4
VBP1P61758 AC012640.1-201ENST00000509915 688 ntTSL 3 BASIC12.53□□□□□ -0.4
VBP1P61758 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC12.53□□□□□ -0.4
VBP1P61758 AC009686.1-201ENST00000522494 364 ntTSL 3 BASIC12.53□□□□□ -0.4
VBP1P61758 SLC25A1P1-201ENST00000528351 927 ntBASIC12.53□□□□□ -0.4
VBP1P61758 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VBP1P61758 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC12.53□□□□□ -0.4
VBP1P61758 AC120045.2-201ENST00000567334 178 ntBASIC12.53□□□□□ -0.4
VBP1P61758 PAM16-211ENST00000575848 518 ntTSL 3 BASIC12.53□□□□□ -0.4
VBP1P61758 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
VBP1P61758 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC12.53□□□□□ -0.4
VBP1P61758 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC12.53□□□□□ -0.4
VBP1P61758 AL844908.2-201ENST00000609461 460 ntBASIC12.53□□□□□ -0.4
VBP1P61758 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.53□□□□□ -0.4
VBP1P61758 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
VBP1P61758 EXOC7-207ENST00000411744 2031 ntAPPRIS ALT1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 AC009533.1-201ENST00000539757 3158 ntBASIC12.53□□□□□ -0.4
VBP1P61758 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC12.53□□□□□ -0.4
VBP1P61758 PPP6R2-209ENST00000612753 4104 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
VBP1P61758 CHI3L1-201ENST00000255409 1792 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
VBP1P61758 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 DDAH1-201ENST00000284031 3920 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
VBP1P61758 KIZ-208ENST00000616848 1875 ntAPPRIS ALT2 TSL 2 BASIC12.53□□□□□ -0.4
VBP1P61758 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
VBP1P61758 CICP9-201ENST00000444451 1913 ntBASIC12.52□□□□□ -0.4
VBP1P61758 PHB-215ENST00000617874 1908 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
VBP1P61758 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VBP1P61758 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
VBP1P61758 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VBP1P61758 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
VBP1P61758 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.52□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms