Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 SLC36A4-201ENST00000326402 6012 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
AP3S2P59780 AC015818.9-201ENST00000591705 4582 ntBASIC12.03□□□□□ -0.48
AP3S2P59780 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 PRTFDC1-201ENST00000320152 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 SIAE-201ENST00000263593 5583 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S2P59780 ANKRD49-210ENST00000544612 2268 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 DDX19B-202ENST00000355992 1692 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 IP6K3-201ENST00000293756 2610 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 METTL12-203ENST00000532971 2037 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
AP3S2P59780 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC12.03□□□□□ -0.48
AP3S2P59780 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 AL356966.1-201ENST00000454752 2367 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
AP3S2P59780 DYRK4-214ENST00000543431 2068 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
AP3S2P59780 SNHG14-212ENST00000549804 7844 ntTSL 5 BASIC12.02□□□□□ -0.48
AP3S2P59780 DCAF12L1-201ENST00000371126 3382 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S2P59780 ARHGEF10-205ENST00000518288 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S2P59780 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S2P59780 USB1-207ENST00000563149 1751 ntTSL 2 BASIC12.02□□□□□ -0.48
AP3S2P59780 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S2P59780 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.02□□□□□ -0.48
AP3S2P59780 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S2P59780 DNMT1-202ENST00000359526 5206 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S2P59780 DIO1-216ENST00000613679 1856 ntAPPRIS ALT1 TSL 5 BASIC12.02□□□□□ -0.48
AP3S2P59780 ABLIM2-206ENST00000447017 2902 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S2P59780 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.48
AP3S2P59780 MAK16-201ENST00000360128 3991 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
AP3S2P59780 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC12.02□□□□□ -0.49
AP3S2P59780 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 ZNF200-205ENST00000431561 3348 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 SULT2A1-201ENST00000222002 1987 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S2P59780 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
AP3S2P59780 ACKR1-201ENST00000368121 1240 ntBASIC12.02□□□□□ -0.49
AP3S2P59780 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
AP3S2P59780 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S2P59780 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 MEP1AP4-201ENST00000423244 1087 ntBASIC12.02□□□□□ -0.49
AP3S2P59780 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC12.02□□□□□ -0.49
AP3S2P59780 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 AL589987.1-201ENST00000453380 819 ntBASIC12.02□□□□□ -0.49
AP3S2P59780 AC093433.1-201ENST00000458048 571 ntBASIC12.02□□□□□ -0.49
AP3S2P59780 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 YBX1P5-201ENST00000509441 847 ntBASIC12.02□□□□□ -0.49
AP3S2P59780 AC104596.2-201ENST00000512793 793 ntBASIC12.02□□□□□ -0.49
AP3S2P59780 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC12.02□□□□□ -0.49
AP3S2P59780 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC12.02□□□□□ -0.49
AP3S2P59780 ARL16-202ENST00000570561 768 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S2P59780 AC099684.2-201ENST00000574520 870 ntTSL 5 BASIC12.02□□□□□ -0.49
AP3S2P59780 ARL16-210ENST00000574938 751 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S2P59780 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S2P59780 MIR4469-201ENST00000583919 79 ntBASIC12.02□□□□□ -0.49
AP3S2P59780 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC12.02□□□□□ -0.49
AP3S2P59780 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC12.02□□□□□ -0.49
AP3S2P59780 RPSAP52-203ENST00000622976 1023 ntBASIC12.02□□□□□ -0.49
AP3S2P59780 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S2P59780 TMEM211-203ENST00000640159 1122 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
AP3S2P59780 CAST-223ENST00000508608 2425 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
AP3S2P59780 TNFAIP3-206ENST00000612899 4735 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
AP3S2P59780 COBLL1-202ENST00000375458 9367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 FAM156B-201ENST00000416841 2537 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S2P59780 Z98885.3-201ENST00000624882 1757 ntBASIC12.02□□□□□ -0.49
AP3S2P59780 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 CYP24A1-203ENST00000395955 2227 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 CMC2-201ENST00000219400 10301 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 BRMS1-201ENST00000359957 1445 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 FAM151A-202ENST00000371304 1444 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
AP3S2P59780 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC12.02□□□□□ -0.49
AP3S2P59780 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 ARHGAP30-201ENST00000368013 4394 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
AP3S2P59780 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
AP3S2P59780 LAS1L-202ENST00000374807 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 ALG3-205ENST00000445626 1533 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 SEMA6A-202ENST00000343348 6878 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 PTPRG-201ENST00000295874 4650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC12.01□□□□□ -0.49
AP3S2P59780 TSN-201ENST00000389682 3420 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 TLE3-220ENST00000559929 3408 ntTSL 5 BASIC12.01□□□□□ -0.49
AP3S2P59780 CAPN1-202ENST00000524773 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 ARRDC5-201ENST00000381781 1638 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
AP3S2P59780 MAP7-208ENST00000617204 4536 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
AP3S2P59780 PHF21B-203ENST00000403565 3586 ntTSL 2 BASIC12.01□□□□□ -0.49
AP3S2P59780 WDR92-201ENST00000295121 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
AP3S2P59780 IL9RP3-201ENST00000442856 1674 ntBASIC12.01□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms