Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDN20P56880 ANKRD36BP2-202ENST00000421951 1899 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN20P56880 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
CLDN20P56880 GABRB2-205ENST00000517901 1779 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDN20P56880 PLD1-201ENST00000331659 2906 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 TRHDE-AS1-201ENST00000426250 3684 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDN20P56880 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN20P56880 TNFRSF11A-201ENST00000269485 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 C21orf59-203ENST00000382549 2503 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC12.87□□□□□ -0.35
CLDN20P56880 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDN20P56880 COX4I1-201ENST00000253452 708 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 ADARB2-AS1-201ENST00000381301 625 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN20P56880 AL645608.5-201ENST00000398216 443 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN20P56880 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN20P56880 AC007274.2-201ENST00000421675 662 ntBASIC12.87□□□□□ -0.35
CLDN20P56880 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 RLN3-201ENST00000431365 580 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 PTPA-217ENST00000434095 870 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN20P56880 UPF3AP2-201ENST00000457924 1132 ntBASIC12.87□□□□□ -0.35
CLDN20P56880 SUPT4H1P2-201ENST00000501248 353 ntBASIC12.87□□□□□ -0.35
CLDN20P56880 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN20P56880 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC12.87□□□□□ -0.35
CLDN20P56880 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN20P56880 TMBIM4-205ENST00000535812 766 ntTSL 4 BASIC12.87□□□□□ -0.35
CLDN20P56880 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 TMBIM4-212ENST00000556010 610 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDN20P56880 AC105129.2-201ENST00000559536 390 ntBASIC12.87□□□□□ -0.35
CLDN20P56880 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN20P56880 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 CENPX-208ENST00000584347 799 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN20P56880 AC012044.1-201ENST00000603431 297 ntBASIC12.87□□□□□ -0.35
CLDN20P56880 AC022001.2-201ENST00000607849 580 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN20P56880 LINC01783-202ENST00000614408 828 ntBASIC12.87□□□□□ -0.35
CLDN20P56880 BX284668.2-205ENST00000619677 828 ntBASIC12.87□□□□□ -0.35
CLDN20P56880 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
CLDN20P56880 EML1-203ENST00000334192 4064 ntTSL 5 BASIC12.87□□□□□ -0.35
CLDN20P56880 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
CLDN20P56880 BRD7P5-201ENST00000299197 1822 ntBASIC12.87□□□□□ -0.35
CLDN20P56880 LGR5-201ENST00000266674 4611 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 AAAS-202ENST00000394384 1703 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CLDN20P56880 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 LINC02486-201ENST00000604157 3000 ntBASIC12.87□□□□□ -0.35
CLDN20P56880 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CLDN20P56880 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.87□□□□□ -0.35
CLDN20P56880 TMUB2-215ENST00000592825 2151 ntTSL 3 BASIC12.87□□□□□ -0.35
CLDN20P56880 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 HIST2H2BF-201ENST00000369167 1954 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
CLDN20P56880 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
CLDN20P56880 AGAP10P-201ENST00000454844 2418 ntBASIC12.87□□□□□ -0.35
CLDN20P56880 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
CLDN20P56880 GP1BA-202ENST00000611961 2339 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
CLDN20P56880 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDN20P56880 HSD17B4-201ENST00000256216 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 ENG-202ENST00000373203 3048 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDN20P56880 CARHSP1-217ENST00000611932 2833 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
CLDN20P56880 SIRPA-202ENST00000358771 3996 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 RARS2-201ENST00000369536 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 BCAS4-201ENST00000358791 1378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDN20P56880 BRMS1-202ENST00000425825 1363 ntTSL 5 BASIC12.86□□□□□ -0.35
CLDN20P56880 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.86□□□□□ -0.35
CLDN20P56880 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
CLDN20P56880 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 RPS16-202ENST00000339471 643 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 NUP210P1-201ENST00000357061 876 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 PUS10-202ENST00000398658 1227 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
CLDN20P56880 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC12.86□□□□□ -0.35
CLDN20P56880 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC12.86□□□□□ -0.35
CLDN20P56880 AC026320.2-201ENST00000434379 478 ntBASIC12.86□□□□□ -0.35
CLDN20P56880 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC12.86□□□□□ -0.35
CLDN20P56880 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC12.86□□□□□ -0.35
CLDN20P56880 CHMP2B-205ENST00000494980 1175 ntTSL 3 BASIC12.86□□□□□ -0.35
CLDN20P56880 AC008723.1-201ENST00000506922 207 ntBASIC12.86□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 52.5 ms