Protein–RNA interactions for Protein: P42898

MTHFR, Methylenetetrahydrofolate reductase, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFRP42898 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC14.59□□□□□ -0.07
MTHFRP42898 MAP3K4-201ENST00000348824 5295 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
MTHFRP42898 AC027601.5-201ENST00000624065 2482 ntBASIC14.59□□□□□ -0.07
MTHFRP42898 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC14.59□□□□□ -0.07
MTHFRP42898 GOLGA8UP-201ENST00000527159 1755 ntBASIC14.59□□□□□ -0.07
MTHFRP42898 PID1-202ENST00000392054 2745 ntTSL 2 BASIC14.59□□□□□ -0.07
MTHFRP42898 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MTHFRP42898 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC14.59□□□□□ -0.07
MTHFRP42898 KLK4-201ENST00000324041 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MTHFRP42898 AL590824.1-201ENST00000403828 1349 ntBASIC14.59□□□□□ -0.07
MTHFRP42898 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC14.59□□□□□ -0.07
MTHFRP42898 SAFB-201ENST00000292123 3042 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
MTHFRP42898 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MTHFRP42898 SLC4A7-212ENST00000446700 4000 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
MTHFRP42898 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.59□□□□□ -0.07
MTHFRP42898 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MTHFRP42898 THBS2-206ENST00000617924 5280 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MTHFRP42898 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
MTHFRP42898 AC092053.3-201ENST00000641308 4975 ntBASIC14.59□□□□□ -0.07
MTHFRP42898 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.58□□□□□ -0.07
MTHFRP42898 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.58□□□□□ -0.07
MTHFRP42898 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC14.58□□□□□ -0.07
MTHFRP42898 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.07
MTHFRP42898 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
MTHFRP42898 BCCIP-203ENST00000368759 1433 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
MTHFRP42898 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.58□□□□□ -0.07
MTHFRP42898 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.07
MTHFRP42898 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
MTHFRP42898 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC14.58□□□□□ -0.08
MTHFRP42898 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
MTHFRP42898 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
MTHFRP42898 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC14.58□□□□□ -0.08
MTHFRP42898 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
MTHFRP42898 C11orf53-201ENST00000280325 1208 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
MTHFRP42898 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
MTHFRP42898 FCN2-202ENST00000350339 943 ntAPPRIS ALT2 TSL 5 BASIC14.58□□□□□ -0.08
MTHFRP42898 COA6-203ENST00000366615 710 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC14.58□□□□□ -0.08
MTHFRP42898 LINC00483-202ENST00000419688 558 ntTSL 3 BASIC14.58□□□□□ -0.08
MTHFRP42898 BUD23-204ENST00000423497 1219 ntTSL 5 BASIC14.58□□□□□ -0.08
MTHFRP42898 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC14.58□□□□□ -0.08
MTHFRP42898 KRT18P15-201ENST00000458108 1291 ntBASIC14.58□□□□□ -0.08
MTHFRP42898 BCL2L12P1-201ENST00000508390 733 ntBASIC14.58□□□□□ -0.08
MTHFRP42898 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC14.58□□□□□ -0.08
MTHFRP42898 AL590235.1-201ENST00000564650 861 ntBASIC14.58□□□□□ -0.08
MTHFRP42898 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC14.58□□□□□ -0.08
MTHFRP42898 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.58□□□□□ -0.08
MTHFRP42898 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 UBE2A-202ENST00000371558 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC14.58□□□□□ -0.08
MTHFRP42898 GPN1-201ENST00000264718 2496 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 C7orf49-214ENST00000620897 1349 ntTSL 3 BASIC14.58□□□□□ -0.08
MTHFRP42898 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
MTHFRP42898 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.58□□□□□ -0.08
MTHFRP42898 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC14.58□□□□□ -0.08
MTHFRP42898 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC14.58□□□□□ -0.08
MTHFRP42898 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC14.58□□□□□ -0.08
MTHFRP42898 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
MTHFRP42898 DUT-208ENST00000559540 1441 ntTSL 2 BASIC14.58□□□□□ -0.08
MTHFRP42898 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.57□□□□□ -0.08
MTHFRP42898 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
MTHFRP42898 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC14.57□□□□□ -0.08
MTHFRP42898 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
MTHFRP42898 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC14.57□□□□□ -0.08
MTHFRP42898 HTR3D-201ENST00000334128 1459 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 C1R-201ENST00000535233 2211 ntTSL 2 BASIC14.57□□□□□ -0.08
MTHFRP42898 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
MTHFRP42898 MINDY2-203ENST00000559228 9238 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
MTHFRP42898 SERPINA1-209ENST00000449399 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC14.57□□□□□ -0.08
MTHFRP42898 TNNT2-207ENST00000367322 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 TMSB4X-202ENST00000380635 767 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
MTHFRP42898 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 DKKL1P1-201ENST00000400550 698 ntBASIC14.57□□□□□ -0.08
MTHFRP42898 LINC01656-201ENST00000415702 630 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
MTHFRP42898 AC023141.7-201ENST00000430646 407 ntBASIC14.57□□□□□ -0.08
MTHFRP42898 BRI3P1-201ENST00000440440 378 ntBASIC14.57□□□□□ -0.08
MTHFRP42898 NALT1-202ENST00000450304 437 ntTSL 3 BASIC14.57□□□□□ -0.08
MTHFRP42898 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC14.57□□□□□ -0.08
MTHFRP42898 RN7SL605P-201ENST00000577229 281 ntBASIC14.57□□□□□ -0.08
MTHFRP42898 FBXO36P1-201ENST00000579006 471 ntBASIC14.57□□□□□ -0.08
MTHFRP42898 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC14.57□□□□□ -0.08
MTHFRP42898 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC14.57□□□□□ -0.08
MTHFRP42898 AL049840.2-201ENST00000602722 535 ntBASIC14.57□□□□□ -0.08
MTHFRP42898 AL031673.1-201ENST00000611460 466 ntBASIC14.57□□□□□ -0.08
MTHFRP42898 AC011462.4-201ENST00000616866 449 ntBASIC14.57□□□□□ -0.08
MTHFRP42898 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms