Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC12.87□□□□□ -0.35
RFC3P40938 TMCO5B-205ENST00000530020 894 ntBASIC12.87□□□□□ -0.35
RFC3P40938 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC12.87□□□□□ -0.35
RFC3P40938 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RFC3P40938 FAM60A-207ENST00000542983 738 ntTSL 4 BASIC12.87□□□□□ -0.35
RFC3P40938 KLF17P1-201ENST00000547105 1126 ntBASIC12.87□□□□□ -0.35
RFC3P40938 AC073573.1-201ENST00000550908 481 ntTSL 3 BASIC12.87□□□□□ -0.35
RFC3P40938 LINC01629-201ENST00000553613 581 ntTSL 4 BASIC12.87□□□□□ -0.35
RFC3P40938 NDUFB10P1-201ENST00000567319 521 ntBASIC12.87□□□□□ -0.35
RFC3P40938 TMEM98-205ENST00000578289 806 ntTSL 3 BASIC12.87□□□□□ -0.35
RFC3P40938 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC12.87□□□□□ -0.35
RFC3P40938 MIR6858-201ENST00000620733 67 ntBASIC12.87□□□□□ -0.35
RFC3P40938 AC009084.3-201ENST00000623356 437 ntBASIC12.87□□□□□ -0.35
RFC3P40938 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFC3P40938 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
RFC3P40938 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
RFC3P40938 VIPAS39-208ENST00000556412 1832 ntTSL 2 BASIC12.87□□□□□ -0.35
RFC3P40938 SEMA6D-208ENST00000558014 6028 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RFC3P40938 DISC1-221ENST00000620189 6689 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RFC3P40938 LOXL3-202ENST00000393937 2398 ntTSL 5 BASIC12.87□□□□□ -0.35
RFC3P40938 RHOH-224ENST00000622175 2254 ntAPPRIS P1 TSL 4 BASIC12.87□□□□□ -0.35
RFC3P40938 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RFC3P40938 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFC3P40938 CPA5-205ENST00000466363 2099 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RFC3P40938 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RFC3P40938 CYP51A1P3-201ENST00000400072 1428 ntBASIC12.87□□□□□ -0.35
RFC3P40938 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RFC3P40938 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFC3P40938 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RFC3P40938 C15orf41-208ENST00000566621 2866 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
RFC3P40938 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.86□□□□□ -0.35
RFC3P40938 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.86□□□□□ -0.35
RFC3P40938 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC12.86□□□□□ -0.35
RFC3P40938 ADCY8-202ENST00000377928 3363 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 KIRREL3-205ENST00000529097 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC12.86□□□□□ -0.35
RFC3P40938 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC12.86□□□□□ -0.35
RFC3P40938 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.86□□□□□ -0.35
RFC3P40938 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.86□□□□□ -0.35
RFC3P40938 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 C7orf61-201ENST00000332375 1004 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 RAB25-201ENST00000361084 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC12.86□□□□□ -0.35
RFC3P40938 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC12.86□□□□□ -0.35
RFC3P40938 AC012442.2-201ENST00000414784 425 ntTSL 2 BASIC12.86□□□□□ -0.35
RFC3P40938 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC12.86□□□□□ -0.35
RFC3P40938 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC12.86□□□□□ -0.35
RFC3P40938 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.86□□□□□ -0.35
RFC3P40938 LINC02062-201ENST00000513175 478 ntTSL 3 BASIC12.86□□□□□ -0.35
RFC3P40938 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.86□□□□□ -0.35
RFC3P40938 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RFC3P40938 DNM1P30-201ENST00000563586 452 ntBASIC12.86□□□□□ -0.35
RFC3P40938 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
RFC3P40938 FGD4-203ENST00000472289 1629 ntTSL 2 BASIC12.86□□□□□ -0.35
RFC3P40938 TRPM2-204ENST00000397932 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 LDB3-209ENST00000623056 2314 ntTSL 5 BASIC12.86□□□□□ -0.35
RFC3P40938 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
RFC3P40938 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RFC3P40938 FAM96A-203ENST00000557835 1536 ntTSL 2 BASIC12.86□□□□□ -0.35
RFC3P40938 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC12.86□□□□□ -0.35
RFC3P40938 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC12.86□□□□□ -0.35
RFC3P40938 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.86□□□□□ -0.35
RFC3P40938 MEST-204ENST00000393187 2380 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
RFC3P40938 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
RFC3P40938 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
RFC3P40938 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
RFC3P40938 DNAJC22-202ENST00000549441 4412 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
RFC3P40938 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 ANKRD42-201ENST00000260047 2514 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RFC3P40938 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.86□□□□□ -0.35
RFC3P40938 CYB5D2-203ENST00000575251 1588 ntTSL 2 BASIC12.86□□□□□ -0.35
RFC3P40938 DHRS4-AS1-204ENST00000555045 1848 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.85□□□□□ -0.35
RFC3P40938 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC12.85□□□□□ -0.35
RFC3P40938 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 CHIT1-202ENST00000367229 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 AC089987.1-201ENST00000551654 2209 ntBASIC12.85□□□□□ -0.35
RFC3P40938 INVS-201ENST00000262456 2968 ntTSL 5 BASIC12.85□□□□□ -0.35
RFC3P40938 SPATA16-201ENST00000351008 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RFC3P40938 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RFC3P40938 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms