Protein–RNA interactions for Protein: P29279

CTGF, Connective tissue growth factor, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTGFP29279 CA6-205ENST00000480186 1493 ntTSL 2 BASIC15.27■□□□□ 0.03
CTGFP29279 AP000787.1-205ENST00000536683 1485 ntTSL 5 BASIC15.27■□□□□ 0.03
CTGFP29279 IGHE-202ENST00000641420 1485 ntAPPRIS P5 BASIC15.27■□□□□ 0.03
CTGFP29279 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTGFP29279 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTGFP29279 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
CTGFP29279 CDK7-201ENST00000256443 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTGFP29279 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC15.26■□□□□ 0.03
CTGFP29279 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
CTGFP29279 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTGFP29279 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTGFP29279 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC15.26■□□□□ 0.03
CTGFP29279 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC15.26■□□□□ 0.03
CTGFP29279 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTGFP29279 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC15.26■□□□□ 0.03
CTGFP29279 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTGFP29279 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
CTGFP29279 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTGFP29279 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC15.26■□□□□ 0.03
CTGFP29279 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CTGFP29279 AC024475.2-201ENST00000312173 879 ntBASIC15.26■□□□□ 0.03
CTGFP29279 ATXN3-201ENST00000340660 1205 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTGFP29279 BNIP1-202ENST00000351486 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTGFP29279 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTGFP29279 MIR193A-201ENST00000384882 88 ntBASIC15.26■□□□□ 0.03
CTGFP29279 SUMO1-202ENST00000392245 1071 ntAPPRIS P1 TSL 3 BASIC15.26■□□□□ 0.03
CTGFP29279 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CTGFP29279 GSG1L2-201ENST00000399363 882 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CTGFP29279 SPTLC1P3-201ENST00000403408 259 ntBASIC15.26■□□□□ 0.03
CTGFP29279 IL1RN-205ENST00000409930 848 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTGFP29279 AC000078.1-201ENST00000420617 682 ntBASIC15.26■□□□□ 0.03
CTGFP29279 AL022725.1-201ENST00000436283 369 ntTSL 2 BASIC15.26■□□□□ 0.03
CTGFP29279 Z84721.1-201ENST00000438841 372 ntBASIC15.26■□□□□ 0.03
CTGFP29279 JPT1-205ENST00000470924 663 ntTSL 5 BASIC15.26■□□□□ 0.03
CTGFP29279 RN7SL479P-201ENST00000472003 300 ntBASIC15.26■□□□□ 0.03
CTGFP29279 AC079340.2-201ENST00000504957 495 ntTSL 2 BASIC15.26■□□□□ 0.03
CTGFP29279 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC15.26■□□□□ 0.03
CTGFP29279 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC15.26■□□□□ 0.03
CTGFP29279 PPY-202ENST00000587006 431 ntTSL 3 BASIC15.26■□□□□ 0.03
CTGFP29279 AC093072.1-201ENST00000589196 602 ntTSL 4 BASIC15.26■□□□□ 0.03
CTGFP29279 AC022382.1-201ENST00000602768 336 ntBASIC15.26■□□□□ 0.03
CTGFP29279 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC15.26■□□□□ 0.03
CTGFP29279 AC127002.1-201ENST00000619123 455 ntBASIC15.26■□□□□ 0.03
CTGFP29279 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CTGFP29279 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTGFP29279 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTGFP29279 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTGFP29279 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
CTGFP29279 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.26■□□□□ 0.03
CTGFP29279 ADCY6-202ENST00000357869 5748 ntTSL 2 BASIC15.26■□□□□ 0.03
CTGFP29279 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
CTGFP29279 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.26■□□□□ 0.03
CTGFP29279 MIR100HG-219ENST00000533109 1794 ntTSL 5 BASIC15.26■□□□□ 0.03
CTGFP29279 ZNF793-205ENST00000587143 1488 ntAPPRIS P1 TSL 4 BASIC15.26■□□□□ 0.03
CTGFP29279 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.26■□□□□ 0.03
CTGFP29279 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
CTGFP29279 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
CTGFP29279 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CTGFP29279 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 AC007389.3-201ENST00000420724 1656 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 KIR2DL4-203ENST00000357494 1396 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC15.25■□□□□ 0.03
CTGFP29279 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.25■□□□□ 0.03
CTGFP29279 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.25■□□□□ 0.03
CTGFP29279 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 MYB-201ENST00000316528 3571 ntTSL 5 BASIC15.25■□□□□ 0.03
CTGFP29279 ASPDH-201ENST00000376916 848 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 KRTAP10-12-201ENST00000400365 873 ntAPPRIS P2 BASIC15.25■□□□□ 0.03
CTGFP29279 SERF2-205ENST00000403425 690 ntTSL 2 BASIC15.25■□□□□ 0.03
CTGFP29279 TUBB8P9-201ENST00000422534 1276 ntBASIC15.25■□□□□ 0.03
CTGFP29279 TUBB8P10-201ENST00000430210 1279 ntBASIC15.25■□□□□ 0.03
CTGFP29279 RBPMSLP-201ENST00000433427 502 ntBASIC15.25■□□□□ 0.03
CTGFP29279 PTPA-219ENST00000435305 530 ntTSL 2 BASIC15.25■□□□□ 0.03
CTGFP29279 RAB34-211ENST00000450529 1184 ntTSL 2 BASIC15.25■□□□□ 0.03
CTGFP29279 VAMP2-203ENST00000481878 557 ntAPPRIS ALT1 TSL 2 BASIC15.25■□□□□ 0.03
CTGFP29279 SLC25A3-212ENST00000549338 1285 ntAPPRIS ALT1 TSL 3 BASIC15.25■□□□□ 0.03
CTGFP29279 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC15.25■□□□□ 0.03
CTGFP29279 INCA1-202ENST00000574617 1260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 TLE2-205ENST00000586422 389 ntTSL 5 BASIC15.25■□□□□ 0.03
CTGFP29279 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC15.25■□□□□ 0.03
CTGFP29279 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC15.25■□□□□ 0.03
CTGFP29279 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC15.25■□□□□ 0.03
CTGFP29279 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC15.25■□□□□ 0.03
CTGFP29279 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 ZFYVE19-215ENST00000570108 1669 ntAPPRIS ALT2 TSL 5 BASIC15.25■□□□□ 0.03
CTGFP29279 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
CTGFP29279 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTGFP29279 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.24■□□□□ 0.03
CTGFP29279 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTGFP29279 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
CTGFP29279 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC15.24■□□□□ 0.03
CTGFP29279 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.24■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms