Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.1□□□□□ -0.31
NR4A1P22736 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NR4A1P22736 CPLX2-201ENST00000359546 5023 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 PACSIN1-207ENST00000620693 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NR4A1P22736 SGSM3-201ENST00000248929 2969 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 TXLNA-201ENST00000373609 5012 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 MIR658-201ENST00000385210 100 ntBASIC13.1□□□□□ -0.31
NR4A1P22736 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.1□□□□□ -0.31
NR4A1P22736 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.1□□□□□ -0.31
NR4A1P22736 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC13.1□□□□□ -0.31
NR4A1P22736 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.1□□□□□ -0.31
NR4A1P22736 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
NR4A1P22736 RPL8-205ENST00000527914 551 ntTSL 3 BASIC13.1□□□□□ -0.31
NR4A1P22736 KRT90P-201ENST00000549264 1064 ntBASIC13.1□□□□□ -0.31
NR4A1P22736 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC13.1□□□□□ -0.31
NR4A1P22736 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC13.1□□□□□ -0.31
NR4A1P22736 RN7SL48P-201ENST00000579283 293 ntBASIC13.1□□□□□ -0.31
NR4A1P22736 C19orf38-203ENST00000592854 1060 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NR4A1P22736 H2BFM-203ENST00000598335 465 ntAPPRIS P1 TSL 5 BASIC13.1□□□□□ -0.31
NR4A1P22736 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC13.1□□□□□ -0.31
NR4A1P22736 AC244669.2-201ENST00000612320 853 ntBASIC13.1□□□□□ -0.31
NR4A1P22736 AC133552.6-201ENST00000613406 534 ntBASIC13.1□□□□□ -0.31
NR4A1P22736 RPS24-214ENST00000613865 538 ntTSL 5 BASIC13.1□□□□□ -0.31
NR4A1P22736 ARFIP2-210ENST00000614314 3846 ntTSL 2 BASIC13.1□□□□□ -0.31
NR4A1P22736 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
NR4A1P22736 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.1□□□□□ -0.31
NR4A1P22736 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NR4A1P22736 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
NR4A1P22736 PAAF1-201ENST00000310571 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 COPS7B-201ENST00000350033 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.1□□□□□ -0.31
NR4A1P22736 PAQR3-209ENST00000512733 9811 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 SCARB2-215ENST00000639145 4471 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
NR4A1P22736 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 PLAG1-203ENST00000429357 1899 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 SCNN1B-202ENST00000343070 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 DAAM2-202ENST00000398904 6224 ntAPPRIS ALT1 TSL 5 BASIC13.1□□□□□ -0.31
NR4A1P22736 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
NR4A1P22736 GCOM1-214ENST00000587652 2329 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
NR4A1P22736 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
NR4A1P22736 NLRP2-201ENST00000263437 3496 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
NR4A1P22736 SUGP2-203ENST00000452918 6176 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A1P22736 GHET1-201ENST00000627071 1906 ntBASIC13.09□□□□□ -0.31
NR4A1P22736 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
NR4A1P22736 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A1P22736 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A1P22736 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A1P22736 KANK4-201ENST00000317477 2080 ntTSL 2 BASIC13.09□□□□□ -0.31
NR4A1P22736 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.09□□□□□ -0.31
NR4A1P22736 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
NR4A1P22736 TOLLIP-207ENST00000527886 3666 ntTSL 2 BASIC13.09□□□□□ -0.31
NR4A1P22736 USP9X-202ENST00000378308 8371 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NR4A1P22736 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC13.09□□□□□ -0.31
NR4A1P22736 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A1P22736 LRFN5-201ENST00000298119 3723 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A1P22736 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC13.09□□□□□ -0.31
NR4A1P22736 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A1P22736 GFRA2-202ENST00000517328 2104 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
NR4A1P22736 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A1P22736 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A1P22736 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A1P22736 PCDHB9-201ENST00000316105 4415 ntAPPRIS P1 BASIC13.09□□□□□ -0.31
NR4A1P22736 SPINT1-201ENST00000344051 3056 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A1P22736 ENG-201ENST00000344849 3059 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A1P22736 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A1P22736 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC13.09□□□□□ -0.31
NR4A1P22736 STXBP1-202ENST00000373302 3967 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A1P22736 AL391647.1-201ENST00000395664 511 ntBASIC13.09□□□□□ -0.31
NR4A1P22736 CNN2P8-201ENST00000421872 913 ntBASIC13.09□□□□□ -0.31
NR4A1P22736 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
NR4A1P22736 EIF3FP3-201ENST00000434851 1086 ntBASIC13.09□□□□□ -0.31
NR4A1P22736 AC244107.1-201ENST00000442033 332 ntBASIC13.09□□□□□ -0.31
NR4A1P22736 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.09□□□□□ -0.31
NR4A1P22736 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC13.09□□□□□ -0.31
NR4A1P22736 SNX29P1-201ENST00000548357 1007 ntBASIC13.09□□□□□ -0.31
NR4A1P22736 DUX4L47-201ENST00000566374 394 ntBASIC13.09□□□□□ -0.31
NR4A1P22736 AL008721.1-201ENST00000609964 604 ntBASIC13.09□□□□□ -0.31
NR4A1P22736 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC13.09□□□□□ -0.31
NR4A1P22736 COX11-210ENST00000639671 696 ntBASIC13.09□□□□□ -0.31
NR4A1P22736 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC13.09□□□□□ -0.31
NR4A1P22736 AC092028.1-202ENST00000641483 3547 ntBASIC13.09□□□□□ -0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms