Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AL355864.2-201ENST00000447420 863 ntBASIC15.73■□□□□ 0.11
TPM3P06753 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC15.73■□□□□ 0.11
TPM3P06753 LINC01336-201ENST00000503568 534 ntTSL 4 BASIC15.73■□□□□ 0.11
TPM3P06753 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC15.73■□□□□ 0.11
TPM3P06753 SERBP1P5-201ENST00000510079 1181 ntBASIC15.73■□□□□ 0.11
TPM3P06753 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
TPM3P06753 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC15.73■□□□□ 0.11
TPM3P06753 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC15.73■□□□□ 0.11
TPM3P06753 MIR4683-201ENST00000579659 81 ntBASIC15.73■□□□□ 0.11
TPM3P06753 C1QTNF1-AS1-202ENST00000581579 865 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC15.73■□□□□ 0.11
TPM3P06753 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 RPSAP52-203ENST00000622976 1023 ntBASIC15.73■□□□□ 0.11
TPM3P06753 TAX1BP1-207ENST00000433216 3174 ntTSL 2 BASIC15.73■□□□□ 0.11
TPM3P06753 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TPM3P06753 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 TAPBP-234ENST00000434618 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 RB1-201ENST00000267163 4840 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 PIK3R5-220ENST00000623421 4318 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 REXO1L6P-201ENST00000603433 1515 ntBASIC15.73■□□□□ 0.11
TPM3P06753 ELP4-203ENST00000395934 1961 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 TMEM130-201ENST00000339375 3015 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
TPM3P06753 PDE2A-218ENST00000540345 3027 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
TPM3P06753 PIP5K1A-204ENST00000409426 3737 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TPM3P06753 AL031714.1-202ENST00000568106 3107 ntTSL 5 BASIC15.72■□□□□ 0.11
TPM3P06753 SLC5A11-203ENST00000449109 2069 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 PAK3-211ENST00000518291 2098 ntTSL 5 BASIC15.72■□□□□ 0.11
TPM3P06753 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 TBC1D14-208ENST00000451522 4149 ntAPPRIS ALT1 TSL 5 BASIC15.72■□□□□ 0.11
TPM3P06753 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 RBM10-201ENST00000329236 3201 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 BCAS3-221ENST00000588874 2948 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TPM3P06753 SCN1B-202ENST00000415950 4537 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 SRC-204ENST00000373578 4630 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TPM3P06753 SMTN-203ENST00000358743 3198 ntAPPRIS P4 TSL 2 BASIC15.72■□□□□ 0.11
TPM3P06753 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC15.72■□□□□ 0.11
TPM3P06753 TBR1-201ENST00000389554 4009 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 NPTN-201ENST00000345330 2444 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 DYNLRB2-201ENST00000305904 497 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC15.72■□□□□ 0.11
TPM3P06753 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC15.72■□□□□ 0.11
TPM3P06753 C2orf27AP3-201ENST00000434123 579 ntBASIC15.72■□□□□ 0.11
TPM3P06753 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC15.72■□□□□ 0.11
TPM3P06753 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TPM3P06753 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
TPM3P06753 AC025279.2-201ENST00000569730 653 ntBASIC15.72■□□□□ 0.11
TPM3P06753 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.72■□□□□ 0.11
TPM3P06753 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
TPM3P06753 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.72■□□□□ 0.11
TPM3P06753 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC15.72■□□□□ 0.11
TPM3P06753 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 AL354718.3-201ENST00000616414 581 ntBASIC15.72■□□□□ 0.11
TPM3P06753 CR382287.1-201ENST00000623954 586 ntBASIC15.72■□□□□ 0.11
TPM3P06753 BSCL2-206ENST00000405837 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 FAM120C-202ENST00000375180 8057 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC15.72■□□□□ 0.11
TPM3P06753 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 ADM2-202ENST00000395738 4276 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 DOT1L-201ENST00000398665 7436 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 ZNF799-202ENST00000430385 2583 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TPM3P06753 ARHGEF33-201ENST00000398800 4300 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TPM3P06753 CES1-201ENST00000360526 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 ANKRD20A1-201ENST00000562196 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TPM3P06753 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM3P06753 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC15.71■□□□□ 0.11
TPM3P06753 PIAS2-201ENST00000324794 4543 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TPM3P06753 SH2D5-201ENST00000375031 3705 ntTSL 2 BASIC15.71■□□□□ 0.11
TPM3P06753 CENPP-203ENST00000375587 8766 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM3P06753 ZNF595-205ENST00000610261 2911 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM3P06753 AC022400.8-201ENST00000623453 3599 ntBASIC15.71■□□□□ 0.11
TPM3P06753 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM3P06753 ZNF302-203ENST00000457781 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM3P06753 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC15.71■□□□□ 0.11
TPM3P06753 FAM153A-220ENST00000513554 1437 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TPM3P06753 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TPM3P06753 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM3P06753 SH3TC1-201ENST00000245105 4226 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TPM3P06753 RAC2-204ENST00000406508 893 ntTSL 5 BASIC15.71■□□□□ 0.11
TPM3P06753 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.71■□□□□ 0.11
TPM3P06753 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TPM3P06753 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC15.71■□□□□ 0.11
TPM3P06753 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TPM3P06753 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms