Protein–RNA interactions for Protein: P04004

VTN, Vitronectin, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTNP04004 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC15.2■□□□□ 0.02
VTNP04004 HNRNPA1P56-201ENST00000505767 954 ntBASIC15.2■□□□□ 0.02
VTNP04004 TRPC7-AS1-201ENST00000514459 460 ntTSL 3 BASIC15.2■□□□□ 0.02
VTNP04004 BAK1P2-201ENST00000532665 631 ntBASIC15.2■□□□□ 0.02
VTNP04004 AC055811.3-201ENST00000584952 686 ntBASIC15.2■□□□□ 0.02
VTNP04004 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
VTNP04004 AC006483.2-201ENST00000609813 515 ntBASIC15.2■□□□□ 0.02
VTNP04004 AP000356.3-203ENST00000614808 601 ntTSL 3 BASIC15.2■□□□□ 0.02
VTNP04004 AC020763.3-201ENST00000625095 2904 ntBASIC15.2■□□□□ 0.02
VTNP04004 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 NEDD4L-238ENST00000635997 4402 ntTSL 5 BASIC15.2■□□□□ 0.02
VTNP04004 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
VTNP04004 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 AADAT-206ENST00000509167 2113 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.2■□□□□ 0.02
VTNP04004 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
VTNP04004 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
VTNP04004 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.2■□□□□ 0.02
VTNP04004 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
VTNP04004 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.19■□□□□ 0.02
VTNP04004 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 NUP210-201ENST00000254508 7193 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
VTNP04004 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
VTNP04004 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC15.19■□□□□ 0.02
VTNP04004 WASIR1-201ENST00000399966 1054 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 KRT17P4-201ENST00000429445 819 ntBASIC15.19■□□□□ 0.02
VTNP04004 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 SOX2-OT-209ENST00000485035 561 ntTSL 4 BASIC15.19■□□□□ 0.02
VTNP04004 RORA-AS1-201ENST00000501579 761 ntTSL 5 BASIC15.19■□□□□ 0.02
VTNP04004 AC091564.6-201ENST00000526633 487 ntTSL 3 BASIC15.19■□□□□ 0.02
VTNP04004 ANO3-205ENST00000531646 1264 ntTSL 4 BASIC15.19■□□□□ 0.02
VTNP04004 PRB3-202ENST00000538488 1283 ntAPPRIS P5 TSL 5 BASIC15.19■□□□□ 0.02
VTNP04004 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC15.19■□□□□ 0.02
VTNP04004 AL359219.1-201ENST00000556311 934 ntBASIC15.19■□□□□ 0.02
VTNP04004 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 THY1-209ENST00000580275 578 ntTSL 3 BASIC15.19■□□□□ 0.02
VTNP04004 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC15.19■□□□□ 0.02
VTNP04004 AC010632.2-201ENST00000588369 1224 ntBASIC15.19■□□□□ 0.02
VTNP04004 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC15.19■□□□□ 0.02
VTNP04004 SOX2-OT-222ENST00000595084 853 ntTSL 5 BASIC15.19■□□□□ 0.02
VTNP04004 SOX2-OT-232ENST00000600386 792 ntTSL 5 BASIC15.19■□□□□ 0.02
VTNP04004 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC15.19■□□□□ 0.02
VTNP04004 CLCN4-201ENST00000380829 2418 ntTSL 5 BASIC15.19■□□□□ 0.02
VTNP04004 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
VTNP04004 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC15.19■□□□□ 0.02
VTNP04004 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
VTNP04004 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 AL009178.2-201ENST00000597278 2719 ntBASIC15.19■□□□□ 0.02
VTNP04004 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC15.19■□□□□ 0.02
VTNP04004 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC15.19■□□□□ 0.02
VTNP04004 KRT4-204ENST00000551956 2576 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 CHST5-201ENST00000336257 3245 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
VTNP04004 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
VTNP04004 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VTNP04004 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VTNP04004 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VTNP04004 NEK3-210ENST00000620675 2072 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
VTNP04004 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VTNP04004 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VTNP04004 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VTNP04004 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VTNP04004 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VTNP04004 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VTNP04004 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
VTNP04004 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15.18■□□□□ 0.02
VTNP04004 SFSWAP-210ENST00000541286 3219 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
VTNP04004 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
VTNP04004 OS9-207ENST00000439210 1946 ntTSL 2 BASIC15.18■□□□□ 0.02
VTNP04004 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC15.18■□□□□ 0.02
VTNP04004 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VTNP04004 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
VTNP04004 RHOC-205ENST00000369636 786 ntTSL 2 BASIC15.18■□□□□ 0.02
VTNP04004 RHOC-207ENST00000369638 1028 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
VTNP04004 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
VTNP04004 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
VTNP04004 CFAP36-203ENST00000403007 759 ntTSL 2 BASIC15.18■□□□□ 0.02
VTNP04004 AL590093.1-201ENST00000416119 623 ntTSL 5 BASIC15.18■□□□□ 0.02
VTNP04004 AL161733.1-201ENST00000421067 462 ntTSL 3 BASIC15.18■□□□□ 0.02
VTNP04004 HIGD1A-203ENST00000430190 741 ntTSL 2 BASIC15.18■□□□□ 0.02
VTNP04004 EMP1-203ENST00000431267 1039 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
VTNP04004 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC15.18■□□□□ 0.02
VTNP04004 BX322557.2-201ENST00000445242 379 ntTSL 3 BASIC15.18■□□□□ 0.02
VTNP04004 BPIFB5P-201ENST00000457066 1099 ntBASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms